Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq8 298 1e-75 seq77 293 4e-74 >seq8 Length=2097948 Score = 298 bits (330), Expect = 1e-75 Identities = 590/862 (68%), Gaps = 32/862 (4%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || |||| |||||| || |||||||| || || Sbjct 772338 ATCTGGCAAATGTACAAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATCTC 772279 Query 42360 GCCAAGGACACGGCCGGCTGG-------GAGTCACTGTCTGAGAACGAAAAGTTTTTCCT 42412 ||||||| || |||| || | ||| | ||| ||| | | ||| | Sbjct 772278 TCCAAGGATCTCCACGACTGGAACAACCGATTGACT---TCAGA-CGAGCAATACTTCAT 772223 Query 42413 CAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCAC 42472 | |||| || || |||||||| ||||| |||||||| ||||||||||| || | Sbjct 772222 CTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTGTTGA 772163 Query 42473 CAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGC 42532 | |||| ||||| ||| | ||||| || |||||||| || |||||||| Sbjct 772162 GCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGATCAT 772103 Query 42533 CATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592 || |||||| | ||||| || ||| | || || | || |||||| ||| || Sbjct 772102 GATGGAGAACATCCACTCCGAAACATACTCTCTCCTCATCGATACCTACATCAAGGACCC 772043 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | | |||||| || ||||| ||| | || || || || |||||| |||||||| Sbjct 772042 TGCCCAGCGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAGAAGGC 771983 Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 ||| ||||| || |||||| || | || | || || | || | || || || Sbjct 771982 GGATTGGGCCATCCGATGGATCCAGGATAAGAACTCTACCTTTGCTCAGCGTCTTGTTGC 771923 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 ||| | ||||| ||||| ||||||||| || ||||| || ||||||||||||||||| Sbjct 771922 TTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTCTGGCTCAA 771863 Query 42773 GCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || || || ||||| || || | ||| || ||||| ||||| | || |||| Sbjct 771862 GAAGCGTGGCCTC-ATGCCTGGTCTGAGCTTTTCTAACGAGCTCATTTCTCGTGATGAGG 771804 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCG 42890 | || || | ||||||||||| ||||| ||| |||||| ||| || ||| | Sbjct 771803 GTCTTCACACCGACTTTGCCTGTCTCCTCCACTC---TCACCTCAAGGGACGTGCCAGC- 771748 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 || || | ||| || ||| ||||| || ||||| || ||| ||||||| || || Sbjct 771747 AAACAGATGATCCAGGACATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTCTTACT 771688 Query 42951 CAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 || | || ||| ||| ||||| ||||||||||| | |||||||| |||||||| | Sbjct 771687 GAGGCTCT-CCCTTGTGCCCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATCGA 771629 Query 43010 GTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACAC 43063 | |||||| || | |||||| | | |||| || || | ||||| | Sbjct 771628 ATTCGTCGCTGATCGTCTCCT------CGTTGCTCTCGGCAACGAGAAGGTGTACAAGTC 771575 Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123 | ||| |||||||| |||||||||||||| | | |||||||||||||| ||||| Sbjct 771574 CACCAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGA 771515 Query 43124 GAAGCGCGTCGCCGACTACCAG 43145 ||||||||| || ||||||||| Sbjct 771514 GAAGCGCGTTGCTGACTACCAG 771493 >seq77 Length=567169 Score = 293 bits (324), Expect = 4e-74 Identities = 885/1361 (65%), Gaps = 47/1361 (3%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || || ||||| ||||||| |||| | || || Sbjct 565328 GTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAAGG 565269 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||| | || || ||||||| || ||||||| || || || || ||||| || | || Sbjct 565268 CTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCGGTAGGCATAGGAGCAAC 565209 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 ||||||||||| | | ||||| ||| || || ||| | ||||||||| Sbjct 565208 GAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGGTTCCCAGTCCCA 565149 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | | | ||||| | | | || ||||||||| ||||| || | |||| Sbjct 565148 AAGGTC--AGAGGGCTTGACATT-------CCACATGTCGAACTGGAGAATACCCTCAGA 565098 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCT 244388 | | ||| ||| | | |||| | ||||||||| || || || || | |||| | | Sbjct 565097 GGCAGGGGAGCCTTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTTGCACAGATGT 565038 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 || ||||| |||| |||||||||||||||||| |||||||| || || |||| Sbjct 565037 AGTA-AGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCT--- 564982 Query 244449 CGCAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCC 244503 |||| || |||| |||| | | |||| | || || || || ||||| || Sbjct 564981 --CAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCACACC 564924 Query 244504 GATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTT 244563 | || ||||||| ||| ||| ||||| | || || | || ||||| ||| Sbjct 564923 AAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGTGGTT 564864 Query 244564 GCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTG 244623 | ||||||| | |||||| | |||||| | | | ||| ||| |||| || Sbjct 564863 GACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCTTCTT 564804 Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683 |||||||| | | | ||| || | || ||| | || | || | | Sbjct 564803 GAAGTCGTA---GCAAGCATCTTCATAGTTGATGA-----AAGAAGGC----AGAGACAA 564756 Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 | ||| |||||||| || || ||||| || | | | ||| | | ||||| ||||| Sbjct 564755 GGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCA 564696 Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803 ||||| || |||||| || |||| || || ||| |||| |||||| || Sbjct 564695 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGATC 564636 Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863 ||||||||||||||| || |||||||| |||||| | || | | || ||| || Sbjct 564635 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAG 564576 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 | | |||||||| | | ||||| |||| |||||| |||||| |||||| || Sbjct 564575 CTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGC 564516 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 ||| || ||| || || || | ||||| ||||| |||||||||||| | Sbjct 564515 CTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGT 564456 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| |||||| || ||| | || |||||| || || |||||||| || || ||| Sbjct 564455 CCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAA 564396 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 ||||| | | | ||| ||| || |||||| | || || | || || || Sbjct 564395 CAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAA 564336 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 ||||||| ||||||| ||||| | ||||| |||| ||| || || |||||||| || || Sbjct 564335 GACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACC 564276 Query 245164 CTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219 ||||| || | | ||||| |||||| | ||||| | || || || |||| Sbjct 564275 CTGGT----CAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGT 564220 Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGG 245276 | || || || || || |||||| | ||| || | | || ||| | | | Sbjct 564219 TGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTT-- 564162 Query 245277 ACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTA 245336 || ||| | || || || |||||| || | ||| || | |||| ||| || | Sbjct 564161 -CAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGA 564103 Query 245337 TGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGG 245396 | || || ||||||||| |||||| | | || ||||| || || ||||| |||| | Sbjct 564102 TACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTG 564043 Query 245397 GGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | | | |||||| | ||||||||| || || || ||| Sbjct 564042 GAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAG 564002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336071876400