Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq77 176 4e-39 >seq77 Length=567169 Score = 176 bits (194), Expect = 4e-39 Identities = 393/583 (67%), Gaps = 8/583 (1%) Strand=Plus/Plus Query 94057 CGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATG 94116 ||||||| || || |||||| |||||| ||||| || |||||||| |||| || ||| Sbjct 564177 CGTGCCACTGGCTCTTACATCGCCGGTACTAATGGTACTTCCAACGGTATCGTTCCCATG 564236 Query 94117 CTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGT 94176 || || || ||||||||| | || || ||||| |||||||||||| | | | ||| Sbjct 564237 CTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTGGTAACAAGCGACCTGGT 564296 Query 94177 TCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGA 94236 | ||||| |||| || ||||| |||||||| ||||| | ||| | || || ||| Sbjct 564297 GCCTTCGCCATCTACCTTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGA 564356 Query 94237 AAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCA 94296 ||||||||||| || || || | || | ||||| |||| ||||| ||| | || Sbjct 564357 AAGAACCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCTTAGCTCTTTGGATCCCT 564416 Query 94297 GACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 || ||||| ||||| || ||||||| |||| || |||| ||| | || || || ||| Sbjct 564417 GATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTCTCATGTGCCCTAACGAA 564476 Query 94357 TGTCCCGGACTGTCCGACGTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGA 94415 || || || || | ||| | || | || ||||| | |||| | ||||| Sbjct 564477 TGCCCTGGCCTTGCTGACTGCTACGG-TGACGAATTTGAGGCTCTGTACGAAAAGTACGA 564535 Query 94416 ATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGA 94475 |||| |||| | ||| ||| | ||| |||||| ||| | || | || Sbjct 564536 GAGAGAGGGTAAGGGTCGCAAGTCTATCAAGGCTCAGAAGCTTTGGTACGCCATTCTTGA 564595 Query 94476 CGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGT 94534 | ||| ||||| || | || | ||| | | |||||| | ||| ||| |||| Sbjct 564596 GGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGATCACTG-CAATCGCAAGA 564654 Query 94535 CCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGT 94594 |||||| || |||| || ||| ||||| || |||||||| ||||| | || Sbjct 564655 GCAACCAAAAGAACCTTGGTACCATCCGAAGCTCCAACCTGTGCACTGAGATCATTGA-- 564712 Query 94595 ATACT--TCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCC 94635 ||||| | || || ||| | ||||| || ||||| | |||| Sbjct 564713 ATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 564755 Score = 125 bits (138), Expect = 7e-24 Identities = 260/384 (68%), Gaps = 10/384 (3%) Strand=Plus/Plus Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053 |||| ||| | ||||||||| | ||| ||| |||||||| | || | ||||||||| Sbjct 565102 AGGGTATTCTCCAGTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC 565161 Query 95054 CTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGC 95113 | || || | ||||| | | |||||| | ||| ||||| || || || |||| Sbjct 565162 CCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGC 565221 Query 95114 CCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCA 95173 | || ||| || ||||||| |||||||||||||| | || || || | |||||||| Sbjct 565222 CTACCGCCAGTACCTCGCAGATTCTTGGCAACAACGAATGCTTTGAGCCTTACACCTCCA 565281 Query 95174 ACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT-A 95232 || | ||| | | || || || || || || |||| || ||||| || || | Sbjct 565282 ACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCTGGCTTCTCA 565341 Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC----AACTGCTACG 95288 || | || || | ||||| | ||| || | ||||||| | |||| Sbjct 565342 AGGATCTTGTCGAC-ATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCATTGCT--- 565397 Query 95289 CGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAA 95348 | ||||| || ||||||||||||| | || || | || |||||||| || ||||| Sbjct 565398 -GATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGAGATCAAGGCTCTGTACAA 565456 Query 95349 GACCGTGTGGGAGATCCCGCAGCG 95372 ||| ||||||||||| | ||||| Sbjct 565457 GACTGTGTGGGAGATTTCTCAGCG 565480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721561229400