Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31]
265 sequences; 36,526,733 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq238 232 8e-56
seq29 98.7 1e-15
seq168 95.1 2e-14
>seq238
Length=975252
Score = 232 bits (256), Expect = 8e-56
Identities = 459/678 (68%), Gaps = 6/678 (1%)
Strand=Plus/Plus
Query 7408 CTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467
|||||| || || || ||||| | | |||||| || ||| | |||||||||||
Sbjct 76886 CTTATGCTTTCGCTTGAACTCGTTAACGAAGTGGTTAACGAGACGGTTGTCGAAATCTTC 76945
Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527
|||||||||||| || || || || || | ||||| || |||||||| | |||||| |
Sbjct 76946 ACCACCCAAGTGAGTGTCACCAGCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGT 77005
Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587
| | || ||||| || ||||||||||| || || || ||||| ||||| || |
Sbjct 77006 AAGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACC 77065
Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647
|| ||||| || |||||||| || || || || || || || || || || || ||
Sbjct 77066 CTCAACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATTCG 77125
Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707
||| ||| || || || || | ||||| || || ||||| || || || |||||
Sbjct 77126 GAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCTTGACGCTGAGAGTCGTT 77185
Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767
|||||||| ||||| || || || |||| |||| ||| |||||| || || || ||
Sbjct 77186 GAAGTAGGCAGGGACAGTGACAACAGCGTTGTTGACAGTCTCACCGAGGTAAGACTCAGC 77245
Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827
| || ||| ||||| || | ||| | || ||||| || | | || ||| |
Sbjct 77246 AGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGGGTGAAGGTCTTCTT 77305
Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887
||||| || || ||||| || || ||| || |||| | ||| | | |
Sbjct 77306 CTCACCCTTGAACTCAACCTCGATGGCGGGCTT---GCCAGCCTTGTCGATGATTGTGAA 77362
Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947
| | | ||||||||| | ||||||| || | ||||| | ||||| | ||
Sbjct 77363 GGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGCGAACTTGCGACCGATCAATCG 77422
Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007
||| || || || || ||||| | |||||||||||| |||||||| || || || ||
Sbjct 77423 CTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACC 77482
Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067
|| ||||| || | || || || ||||| | || ||||| ||||| || || ||
Sbjct 77483 AATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTTCGGTTACCCTG 77539
Query 8068 GTCGTTCGCAATAATTTC 8085
|||||| || || || ||
Sbjct 77540 GTCGTTGGCGATGATATC 77557
Score = 138 bits (152), Expect = 1e-27
Identities = 527/829 (64%), Gaps = 19/829 (2%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || ||||| || ||||| | || ||| || || || || || ||
Sbjct 75925 TCATCCTCCTCCTTGTACTTCTCAGCATCGTTGAGCATGCGCTCGATCTCCTCCTTGGAC 75984
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| || || || || ||||| | ||| || || | |||| || |
Sbjct 75985 AGGCGGCCCTTGTCGTTGGTGATGACGATCTTGTTGGACTTGCCGGTACCCTTCTCGACG 76044
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || |||| ||||| || ||||| | |||||| | || | ||| || || |
Sbjct 76045 GCGGAAACGTTCATGATACCGTTGGCATCGAGATCGAAGGTGACCTCAATCTGGGGAACA 76104
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | || ||||| || | || || | || | | |||| ||| |
Sbjct 76105 CCACGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCTTG 76164
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| || || ||||| || ||||| | || || |||| || || ||
Sbjct 76165 GTGCGCTGGCGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGAAG 76224
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| ||||||| | ||||| | ||||| || || || | || || | | ||||
Sbjct 76225 GTAGAGAAGACCTCGGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGGATGAGCTTGGTC 76284
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| |||||||| || |||| || ||||| ||||| | ||||| | ||| | |
Sbjct 76285 ATCATACCACCAGCGGTCTCGATACCGAGAGAGAGAGGGGCGACGTCGAGGAGCAGAA-- 76342
Query 6989 TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACCG 7037
||| | || || |||| |||| | | ||| || || ||||| |
Sbjct 76343 TCTCG------TTGGTGGCCTTGCTAGAGGTGTCACCAGAGAGGATAGCAGCCTGGACAG 76396
Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097
|| ||||| || || |||||||| ||||| || | || || | || || ||||| |
Sbjct 76397 CGGCACCGTAGGCAACAGCCTCATCAGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGA 76456
Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157
| || || | | | | || | ||||| || || ||||||||||| | ||||
Sbjct 76457 AGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACGA 76516
Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217
| || | || || || |||||||| | ||| ||| ||||| || | |
Sbjct 76517 TCTCGTGGACAAGGGACTTGTCGATCTTGGCGTCGGTAAGGACACGGTCGACGGGCTGGA 76576
Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277
| ||||| | ||| || || ||||| ||||| |||||||| ||||| || |
Sbjct 76577 TGGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAAGTGT 76636
Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337
||||||||| || ||| | | || || || ||||||| || || || | ||||| |
Sbjct 76637 AGAAATCAATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAAGAAGAGA 76696
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386
|||||||| ||||||||||| || ||||| | ||| ||||| |||||
Sbjct 76697 GAGTTCGCTTGGCGCGCTCACAAGCGGTTCGGAGACGTCGAAGAGCACG 76745
>seq29
Length=1740061
Score = 98.7 bits (108), Expect = 1e-15
Identities = 170/244 (70%), Gaps = 5/244 (2%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||| | ||| || || || ||||| || || || ||||| ||
Sbjct 536393 ATCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCGAGAACCTCGAAGATGCC 536452
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| |||||| | || |||||||| || ||||||||||| || || | || |
Sbjct 536453 ATCGTCAATGGAGAGCAGAGAAACATCGAAGGTACCACCACCGAGATCGTA---GACAAT 536509
Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
| || | || ||| | | |||||| || |||||||| |||||||| || || || || |
Sbjct 536510 GATC-TGGCGCTCGCCATCGTTCTTGTCAAGACCGTAAGCGATAGCGGCGGCGGTAGGCT 536568
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || | ||| || || ||| || || ||||| | | || || || || || ||||
Sbjct 536569 CGTTGACAATTCGGAGGACGTTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGTC 536628
Query 7695 GTTG 7698
| ||
Sbjct 536629 GCTG 536632
>seq168
Length=914594
Score = 95.1 bits (104), Expect = 2e-14
Identities = 227/339 (67%), Gaps = 12/339 (4%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||||||||||||||| | || ||||| || ||| | ||||| || || | |||
Sbjct 653574 ATCGAAATCTTCACCACCGAGATGGGTATCACCGTTGGTGGACTTGACCTCGAAAACACC 653515
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| || | | | || | ||| || ||||||||||| || || | | ||
Sbjct 653514 GTTCTGGATCTCAAGGATGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGAC 653455
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
| | || | || ||| ||||||||||| || | ||| || || || || ||
Sbjct 653454 AATGCTGTCAGCCTC------CTTCTCGAGACCGTAGGCAAGAGCGGCGGCAGTAGGCTC 653401
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCT-TG 7692
|||| | ||| || ||| ||||| ||||| ||| | || || || || ||| ||
Sbjct 653400 GTTAACGACACGGAGGACGTTGAGGCCGGCAAT--TTGACCAGCGTCCTTGGT-GCTCTG 653344
Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752
||| || || ||||| |||||||| ||||| || ||||| |||| | ||| ||||
Sbjct 653343 TCGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTTCTTGATAGGCTTAGA 653284
Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791
||| |||| || ||| | || ||||| ||| | || ||
Sbjct 653283 GAGGTACGCCTCGGCGGTCTCCTTCATCTTGTTGAGGAC 653245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635130696122600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |