Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq77 187 3e-42 seq8 132 6e-26 seq59 95.1 2e-14 >seq77 Length=567169 Score = 187 bits (206), Expect = 3e-42 Identities = 537/815 (66%), Gaps = 21/815 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| | ||| ||||||| ||||| | || ||| || || |||||||| ||| Sbjct 563909 CCCGCAGCATATGATCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGT 563968 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 |||||||||||| || ||||| | | |||| || |||| || || | || Sbjct 563969 CTTGGAGACATACAACCTCATGTCAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATT 564028 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| ||||| ||| || || | || || |||||| ||| | |||||||| Sbjct 564029 CAACGCCGGTACTCCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGA 564088 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || |||| || |||| || |||| |||||| || || ||| |||||| Sbjct 564089 CAGCATTGATGGTATCTACGATACCCTCAAAACTTGTGCCATGATTTCCAAGATGGCTGG 564148 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 |||||| || || || ||| || | |||| ||| || ||||| || Sbjct 564149 TGGTATTGGCTTGAACGCCCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGTACTAA 564208 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 |||| || | ||||| |||| ||||| || || || ||| ||| || || || || Sbjct 564209 TGGTACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGT 564268 Query 111971 AAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | ||| | |||| || || |||| |||| |||||||||||||| Sbjct 564269 TGACCAGGGTGG---TAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGGCA 564325 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGG 112082 ||| || || | ||||||||||| | || ||||| ||| | ||||||| |||| Sbjct 564326 CGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGC 564385 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 | || || || |||| ||||| ||||| || ||||| ||||||||| | || ||| Sbjct 564386 T--CGTGACCTGTTCTTAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGA 564443 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | ||| | ||| ||||| | || || || || || || || || | || | || Sbjct 564444 AACGGCGAATGGACTCTCATGTGCCCTAACGAATGC-CCTGGCCTTGCTGACTGCTACGG 564502 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 ||| || ||||| || || ||| |||||||||| ||| || || | | || | | Sbjct 564503 TGACGAATTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGTAAGG-GTC-GCAAGTCT 564560 Query 112262 GCCA--GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 || ||| | || | | ||| | || ||||| || | || || ||||| || | || Sbjct 564561 ATCAAGGCT-CAGAAGCTTTGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCC 564619 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 | ||||| ||||| || ||| || | ||||| || |||||||| | ||| || Sbjct 564620 TTTCATGCTCTACAAGGATCACTGCAATCGCAAGAGCAACCAAAAGAACCTTGGTACCAT 564679 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || |||||||| || || || ||| | |||| Sbjct 564680 CCGAAGCTCCAACCTGTGCACTGAGATCATTGAAT 564714 >seq8 Length=2097948 Score = 132 bits (146), Expect = 6e-26 Identities = 352/525 (67%), Gaps = 17/525 (3%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTA---AAT 101873 ||||| ||||| ||| | |||||||| |||||| | |||| ||||| | | | | | Sbjct 772302 TGGACAGCTGAGGAGATCGATCTCTCCAAGGATCTCCACGACTGGAACAACCGATTGACT 772243 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 | | || | | ||||| |||| || || ||||| |||| ||||| || || Sbjct 772242 TCAGACGAGCAATACTTCATCTCCCACATTCTTGCTTTCTTCGCTGCCTCCGACGGCATC 772183 Query 101934 GTTTTTGAGAATATCAATAA-CAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 101991 || ||||||| | | | | | | || | ||||| || |||| | || || ||| Sbjct 772182 GTCAATGAGAATCTTGTTGAGCGATTCAGCGGC-GAGGTCCAGATCCCC-GAGGCTCGAT 772125 Query 101992 CTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 102050 ||||||| || || | |||| ||| | | | || || |||||| | ||| Sbjct 772124 GCTTCTATG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCTCTCCTC 772066 Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || || | || || ||||| ||| || | | ||||| | ||| | | || Sbjct 772065 ATCGATACCTACATCAAGGACCCTGCCCAGCGTACATACCTCTTCAACGCCGTTGACACT 772006 Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTCG 102167 |||| || || | |||||| ||||||||||| || ||| | |||| || || Sbjct 772005 ATTCCTTGCATCCGAAAGAAGGCGGATTGGGCCATCCGATGGATCCAGGATAAGAACTC- 771947 Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227 | |||||||| |||| || | || ||||| |||||||||||||||||| ||| Sbjct 771946 --TACCTTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGT 771889 Query 102228 TCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 |||| ||| | || | |||||||||||||| || |||||||| ||||| |||| || Sbjct 771888 GCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTC 771830 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||| || |||||||| ||||| || ||| || ||||| Sbjct 771829 TAACGAGCTCATTTCTCGTGATGAGGGTCTTCACACCGACTTTGC 771785 >seq59 Length=2245598 Score = 95.1 bits (104), Expect = 2e-14 Identities = 190/275 (69%), Gaps = 10/275 (4%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 |||||||||||| || || |||| |||||| || || | || | | | || || Sbjct 821227 GGCATCAATCTCGTCGATAAAGATGATGCAAGGGGCGTTCTTACGGCCCTCGGCGAACAG 821286 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182 ||| ||||||||| | || ||||||||||||||||| || || | | || || Sbjct 821287 ATCTCGTACACGCGAAGGTCCAACACCAACAAACATCTCAACGAATTCGGAACCGCTCAC 821346 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 | || | |||||| || ||| |||||||| |||| ||| || | |||||||| | Sbjct 821347 ACTGAA-GAAGGGTACTCCAGACTCACCCGCCGTGGCCTTGGCAAGCAACGTCTTACCAG 821405 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---ACTTCCAAAGT 16299 |||| || || || | | ||||||||||| |||||||| || || |||| | Sbjct 821406 TACCGGGGGGTCCAGCCAAAATAGCACCTCGTGGGATCTTGGCACCCAGCTTTTCAAACT 821465 Query 16300 ATCTCTCAGGTTGCTT-AAGAAAATCCACAATCTC 16333 ||||||| ||||| ||||| | ||||| ||| Sbjct 821466 ---TCTCAGGCTGCTTCAAGAAGCT-CACAAACTC 821496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740343790800