Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq59 114 2e-19 seq77 113 6e-19 seq8 105 8e-17 seq36 104 3e-16 >seq59 Length=2245598 Score = 114 bits (126), Expect = 2e-19 Identities = 86/101 (85%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251 ||||||||||| |||||||| || ||||| |||| |||||| | || |||||||||||| Sbjct 1181283 AACTACCTCGATATCAAGCCCCTTCTCGACGTTGGATGCAAGACCGTCGCCAACATGATC 1181224 Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 ||||||||| | |||||||| ||||| |||||||| || || Sbjct 1181223 AAGGGCAAGGCACCCGAGGAAATCCGTAAGACCTTCAATAT 1181183 >seq77 Length=567169 Score = 113 bits (124), Expect = 6e-19 Identities = 205/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| || || |||| ||| || || || |||||||| |||| |||||||| Sbjct 564275 CTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGA 564216 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 || || || || || | ||| | ||| | ||| || | ||| ||| ||||| Sbjct 564215 AGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCGTTCAAGCC 564156 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || || ||| |||||| || | || || |||||| || |||||||| || || Sbjct 564155 AATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGATACCATC 564096 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| ||||||| || || || ||||| || || || || || | || || Sbjct 564095 AATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACC 564036 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||| | ||||| | || ||||| |||| | |||||| || ||| || Sbjct 564035 GGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATGT 563976 Score = 87.8 bits (96), Expect = 2e-11 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || || | || ||||| || || ||| ||||||||| |||||||||||| || Sbjct 564411 TCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGA 564352 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 1628582 | || || | |||| | |||||||||||| ||||| |||||| ||| ||||| || Sbjct 564351 GATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACC 564294 >seq8 Length=2097948 Score = 105 bits (116), Expect = 8e-17 Identities = 174/250 (70%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || | |||||| |||||| |||||||||||||| | || ||||| Sbjct 771488 GCCTTCTGGTAGTCAGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATG 771547 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | |||||| ||| ||| ||||| | || Sbjct 771548 TTCTCCATGAAGTCGAAAGGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAACG 771607 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || || || ||||| || ||||||||||| ||||||| || ||||||||||| Sbjct 771608 AGGAGACGATCAGCGACGAATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGC 771667 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | ||| | | |||||| | ||| || ||||| ||| ||| Sbjct 771668 AGGGCACAAGGGAGAGCCTCAGTAAGAAACTCCTGCTCAATAGAAACGGCATCGGTGATA 771727 Query 868931 ATCTGCCTGG 868940 || | ||||| Sbjct 771728 ATGT-CCTGG 771736 Score = 91.5 bits (100), Expect = 2e-12 Identities = 176/251 (70%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGA 869273 || || ||||||||||| |||||||||||||| |||||| | || || || ||| || Sbjct 771839 AGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATG--GAAGCAAAGGCACCGCTGA 771896 Query 869274 AAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT 869333 | ||||| ||||| ||||| ||||| | | || |||| |||||| || || | || Sbjct 771897 AGAAGATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAG--GTAGA-GTTCT 771953 Query 869334 CCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGA 869393 | | |||||| || ||||| || ||||| || | | | || | ||||| | Sbjct 771954 TATCCTGGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAA 772013 Query 869394 TGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGC 869452 |||| ||||||| || | | ||| |||||||||| ||||| ||||| ||||| Sbjct 772014 CGGCGTTGAAGAGGTATGTAC-GCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGA 772072 Query 869453 GAATAGGTCTC 869463 || || || || Sbjct 772073 GAGTATGTTTC 772083 >seq36 Length=1468341 Score = 104 bits (114), Expect = 3e-16 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||| ||||| || || || ||||| ||||| | ||| | || ||||||||| Sbjct 141641 GACAGCACTGGCGGAACCGTCACCTGCGTCATCCGCAATGCGCCCTCTGGTCTCGGCGAG 141700 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | ||||| | ||||||||||||||| |||| ||||| ||| | Sbjct 141701 CCCTGCTTCGACAAGCTGCAGGCCACCCTCGCCCACGCCATGATGTCCATCCCCGCCGTC 141760 Query 19167 AAGGGATTCGAG 19178 |||| |||||| Sbjct 141761 AAGGCCTTCGAG 141772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107117452859005