Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq77 134 1e-26 seq92 113 4e-20 >seq77 Length=567169 Score = 134 bits (148), Expect = 1e-26 Identities = 412/631 (65%), Gaps = 17/631 (3%) Strand=Plus/Minus Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 ||||||||||||||| || | || ||| ||||||||| ||||| ||| | | || Sbjct 564536 CTCGTACTTTTCGTACAGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCA 564477 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 | || ||| |||||||| | |||| ||||||| || ||| ||| ||||||| ||||| Sbjct 564476 TTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATC 564417 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481 || ||||| | ||| || | || || || || || ||| ||| ||| Sbjct 564416 AGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTT--C 564359 Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 |||| | | |||||| || || ||||| ||||||||||| || || |||||||| | Sbjct 564358 TTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAG 564299 Query 139540 GCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 || || || ||| ||||| || || |||| || ||| || ||||| || ||| Sbjct 564298 GCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGC 564239 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCG 139652 | ||| || | | |||| | | || || || || || | | | | | | || Sbjct 564238 AGCATGGGAACGATACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGT---- 564183 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || |||| || | || | ||| || || || | | ||||| || | | || Sbjct 564182 GGCACGGATTCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACA 564123 Query 139713 ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772 | | || ||||| ||||| |||||||| |||| ||| || || ||||| Sbjct 564122 AGTTTTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCA 564063 Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832 ||| ||||| || || || || ||||| || | ||| || || || || ||||| Sbjct 564062 TGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAA 564003 Query 139833 -CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGA 139891 | ||| || ||||| | | ||| || || | | | | | ||||||| || || Sbjct 564002 GAACTTGCTT-GACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGA 563944 Query 139892 TACCGACAGAGACTCGCATCAGCATATGTTG 139922 | || |||| ||||||||| | |||||| || Sbjct 563943 TTCCAACAGCGACTCGCATGATCATATGCTG 563913 >seq92 Length=1659281 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || | ||||| || |||||||| ||||| || || | Sbjct 963421 ACCATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACTATTACCCTCGAGGTTGAGTCA 963362 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || |||||||| ||||| || || || ||||| ||| Sbjct 963361 TCCGACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGAT 963302 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||| || ||||| || ||||| |||||| | | | | || || || Sbjct 963301 CAGCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 963242 Query 24881 AACATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||||| ||||| || ||| Sbjct 963241 AACATCCAGAAGGAGTCGACTCTCCAC 963215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896109714200