Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 149 1e-29 seq59 114 2e-19 seq64 104 4e-16 >seq8 Length=2097948 Score = 149 bits (164), Expect = 1e-29 Identities = 223/309 (72%), Gaps = 11/309 (4%) Strand=Plus/Plus Query 794362 TCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAG 794421 ||||| ||||| || || ||||||||||| |||||||||||||| ||||||| | | Sbjct 771824 TCGTTAGAAAAGCTCAGACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAA--G 771881 Query 794422 AAACTGC-CCGA-GAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAA 794479 || || ||| ||| ||||| ||||| ||||| ||||| | || || |||| |||| Sbjct 771882 CAAAGGCACCGCTGAAGAAGATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAA 771941 Query 794480 AAGTGTCCAG-GCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACC 794538 | || || | || | | |||||| || ||||| || ||||| || | | Sbjct 771942 AGGT----AGAGTTCTTATCCTGGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATG 771997 Query 794539 GAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTA 794597 | || | ||||| | |||| ||||||| || | || | | |||||||||| ||| Sbjct 771998 CAAGGAATAGTGTCAACGGCGTTGAAGAGGTATGTACG-CTGGGCAGGGTCCTTGATGTA 772056 Query 794598 GGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCC 794657 ||| ||||||||||| ||||| || || ||||||||||| || || ||||||||| || Sbjct 772057 GGTATCGATGAGGAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACC 772116 Query 794658 ATAAAAGCA 794666 ||| ||||| Sbjct 772117 ATAGAAGCA 772125 Score = 107 bits (118), Expect = 3e-17 Identities = 166/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 |||||| |||||| |||||||||||||| | || ||||| |||||| | ||| Sbjct 771506 ACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAA 771565 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACG 794036 ||||||| | | ||| ||||||| ||||| | | || || || || |||||| Sbjct 771566 GGGTTGGTGGACTTGTACACCTTCTCGTTGCCGAGAGCAACGAGGAGACGATCAGCGACG 771625 Query 794037 AATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC-CACGGGCAGCGA 794095 ||||| |||||||| ||||||| || ||||||||||| || || || ||| || | Sbjct 771626 AATTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGCAGGGCACAAGGG-AGAGC 771684 Query 794096 CTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGG 794148 ||| | | |||||| | ||| || ||||| ||| |||| || | ||||| Sbjct 771685 CTCAGTAAGAAACTCCTGCTCAATAGAAACGGCATCGGTGATAATGT-CCTGG 771736 >seq59 Length=2245598 Score = 114 bits (126), Expect = 2e-19 Identities = 86/101 (85%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 2035653 AACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATC 2035712 ||||||||||| ||||||||||| ||||| | || ||||||||||| |||||| | ||| Sbjct 1181283 AACTACCTCGATATCAAGCCCCTTCTCGACGTTGGATGCAAGACCGTCGCCAACATGATC 1181224 Query 2035713 AAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 ||||||||| | |||||||| ||||| |||||||| || || Sbjct 1181223 AAGGGCAAGGCACCCGAGGAAATCCGTAAGACCTTCAATAT 1181183 >seq64 Length=684838 Score = 104 bits (114), Expect = 4e-16 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| ||||||||||||||||| |||||||||||| |||| || || ||| | | Sbjct 4522 GTACTTGGTAACGGCCTTGGTACCCTCGGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 4463 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| ||||| || | |||||||||||| |||| Sbjct 4462 GATGAGGCGGACAGAGGTCTGGATCTCTCGGG 4431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916218210741335