Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq227 131 1e-25 seq92 113 3e-20 seq36 98.7 6e-16 >seq227 Length=372751 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| |||| ||||||||| ||||| ||||| ||| |||| |||| Sbjct 137128 AGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 137187 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || || ||||| ||||| |||||||| | || | ||||||||||| Sbjct 137188 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 137247 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || |||| ||| || ||| Sbjct 137248 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 137307 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || |||||||||||||| || || ||||||||||| Sbjct 137308 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATGAT 137342 >seq92 Length=1659281 Score = 113 bits (124), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||||| ||| |||||||| ||||| ||||| || ||| | || | || Sbjct 962698 AGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGACCGTCC 962757 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| |||| ||| ||||| || | || | ||||||||||| Sbjct 962758 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 962817 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || | |||||| || | ||| || Sbjct 962818 TGGATCTTGGACTTCAC--AT--TGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGAT 962873 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || ||||||||||| || ||||| ||||| Sbjct 962874 GGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 962909 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||||||||| ||||| || ||| |||| |||| Sbjct 962926 AGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 962985 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| |||| ||| ||||| || | || | ||||||||||| Sbjct 962986 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 963045 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| |||| ||| || ||| Sbjct 963046 TGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAGGGTAATAGTC 963105 Query 34946 TTTCCCGTGAGGGTCTTTAC 34965 || || || | |||||| || Sbjct 963106 TTGCCAGTCAAGGTCTTGAC 963125 Score = 102 bits (112), Expect = 5e-17 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||| ||||| ||||| || ||| |||| |||| Sbjct 963207 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 963266 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| |||| ||| ||||| || | || | ||||||||||| Sbjct 963267 TCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 963326 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || | ||| || || | ||| || Sbjct 963327 TGGATCTTGGACTTCAC--AT--TGTCGATGGTGTCGGATGACTCAACCTCGAGGGTAAT 963382 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || | |||||| || |||||||||||| Sbjct 963383 AGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATG 963419 >seq36 Length=1468341 Score = 98.7 bits (108), Expect = 6e-16 Identities = 134/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| | || |||| || || ||||| |||||||||| Sbjct 1090381 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1090322 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| ||||| || | || | ||||||||||| | || || ||||| || Sbjct 1090321 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 1090265 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || | |||||| || | ||| |||||||| ||||| |||||||| Sbjct 1090264 -TGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 1090206 Query 34964 ACAAA 34968 || || Sbjct 1090205 ACGAA 1090201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691748114035