Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq8 181 2e-39 >seq8 Length=2097948 Score = 181 bits (200), Expect = 2e-39 Identities = 357/513 (70%), Gaps = 24/513 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||||||||| ||||| || |||||| |||| | Sbjct 772339 GATCTGGCAAATGTAC-AAGAAGGCAGAGGCCTCCTTCTGGACAGCTGAGGAGATCGATC 772281 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTCGCTGAGCGAC----GACGAGCGCCATTT 1455886 || | || |||| ||||| | || ||| ||||||| | || Sbjct 772280 TCTCCAAGGATCTCCACG----ACTGGAACAACC-GATTGACTTCAGACGAGCAATACTT 772226 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| ||| | || || ||| ||||| ||| ||| |||||||| ||||| || | Sbjct 772225 CATCTCCCACATTCTTGC-TTTCTTCGCTGCCTCCGACGGCATCGTCAATGAGAATCTTG 772167 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 | || || | |||||||| | || ||||| || | || || || ||||||| Sbjct 772166 TTGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGTTTCCAGA 772107 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || ||||||||||| ||||| ||||| ||||| ||||| |||||| |||||| Sbjct 772106 TCATGATGGAGAACATCCACTCCGAAACATACTCTCTCCTCATCGATACCTACATCAAGG 772047 Query 1456067 ACCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 |||| | | || | || ||||||| |||| | ||||| | || | | | || Sbjct 772046 ACCCTGCCCAG-CGTACATACCTCTTCAACGCCGTTGACACTATTCCTTGCATCCGAAAG 771988 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 ||||| || ||||| || |||||| | | | | ||| || |||||| |||| | Sbjct 771987 AAGGCGGATTGGGCCATCCGATGGATCCAGGA-TAAGAACTCTAC-CTTTGCTCAGCGTC 771930 Query 1456186 TCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATCTT 1456242 | || | ||||| | ||| ||||| ||||| ||| ||| || || || ||||||| Sbjct 771929 TTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCT--TCCATCTT 771872 Query 1456243 TTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||| ||||||||||| ||||| Sbjct 771871 CTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT 771839 Score = 96.9 bits (106), Expect = 5e-14 Identities = 175/251 (70%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 || ||| ||| ||||| || ||| | |||||| | | ||| | || || || Sbjct 771729 ATTATCACCGATGCCGTTTCTATTGAGCAGGAGTTTCTTACTGAGGCTCTCCCTTGTGCC 771670 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || ||||||||||| ||| | |||||| |||||||| ||||| ||||| || || | Sbjct 771669 CTGCTCGGCATGAACTCCAAC-CTCATGAAGCAGTACATCGAATTC-GTCGCTGATCGTC 771612 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | |||| || |||||| || ||||| ||| | | ||||||| ||| | ||| Sbjct 771611 TCCTCGTTGCTCTCGGCAACG-AGAAGGTGTACAAGTCCACCAACCCTTTCGACTTCATG 771553 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCC 1456761 ||| ||||| || | |||||||||||||| |||||| ||||| || || ||| Sbjct 771552 GAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCTGACTACCAG 771493 Query 1456762 AAGGCCGGCGT 1456772 |||||||| || Sbjct 771492 AAGGCCGGTGT 771482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177785640262930