Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq8 152 7e-32 seq77 114 2e-20 >seq8 Length=2097948 Score = 152 bits (168), Expect = 7e-32 Identities = 373/559 (67%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 ||||| ||||| || || |||||||| | | ||| | ||||||||||| | || Sbjct 771782 CAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAGA 771841 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| || |||||||| |||||||| || |||| |||||| | || |||||| Sbjct 771842 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAG 771901 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGT 39793 || || || || || ||||| |||||||| | || | | | | | | || || Sbjct 771902 ATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTGG 771961 Query 39794 ATCCA-CTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| | || |||||||| || ||||| | ||||| || || || | || || Sbjct 771962 ATCCATCGGATG-GCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 772020 Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| | |||| | || || || | || ||||| || | ||| || Sbjct 772021 GAAGAGGT-ATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTATG 772079 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 |||| || |||||||| || ||| ||||| || || || || |||| || || | | Sbjct 772080 TTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGA 772139 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 | || ||||| | |||| || | | ||| ||||| || || || || || | Sbjct 772140 TCTGGACCTCGCCGCTGAATCGCTCAACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 772199 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCC 40088 | || || || | | || || || |||| || || | |||||| || |||| Sbjct 772200 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 772259 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| | || ||| || || | ||| | || ||||||||||| || || |||||||||| Sbjct 772260 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 772319 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | ||| || Sbjct 772320 TCTTGTACATTTGCCAGAT 772338 >seq77 Length=567169 Score = 114 bits (126), Expect = 2e-20 Identities = 418/649 (64%), Gaps = 4/649 (1%) Strand=Plus/Minus Query 69547 CCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATA 69606 ||||| ||||| || || ||||| | | ||| | | | || || || ||||| Sbjct 564484 CCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATG 564425 Query 69607 AATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 || ||||| || ||||||||||||| || || || | | | || || || || Sbjct 564424 AAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCG 564365 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 || ||| ||||| || ||||| | | || | |||||||| || || || || Sbjct 564364 TGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATG 564305 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | | | || ||||| || || || ||||| || | ||| | |||||||| || | Sbjct 564304 GCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAAC 564245 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 || | |||||| |||| ||||| || || ||||||| || || | || ||| || Sbjct 564244 ACACGCAGCATGGGAACGATACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCA 564185 Query 69847 CTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGC 69905 | || || || | | | | | || || || || ||||| || || || | || Sbjct 564184 GTGGCACGGAT-TCGGTGGGCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGC 564126 Query 69906 ACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAA 69965 |||| ||| | || || || ||||| || ||||| || || |||| | || ||| || Sbjct 564125 ACAAGTTTTGAGGGTATCGTAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAA 564066 Query 69966 ACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025 || || | ||| | ||| ||| || || || ||||| || || ||| ||||| Sbjct 564065 GCATGATGAAAGCTGAGGCTGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGT 564006 Query 70026 GAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGAT 70084 ||| | || || | || |||||||| || | | || ||||| ||| Sbjct 564005 GAAGAACTTGCTTGACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCGTCACCCCA 563946 Query 70085 GAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTA 70144 | ||||| | ||||| ||||| | ||||||||| || || || | |||| | | Sbjct 563945 G-ATTCCAACAGCGACTCGCATGATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAA 563887 Query 70145 TTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 | | | || ||||||| | || ||| || |||||||||||||| Sbjct 563886 TCTGTAGCAAGTATGATCTGGACAAGGTTCGGAAGCCAAAATAGTTGTA 563838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906524614600