Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq77 149 8e-31 >seq77 Length=567169 Score = 149 bits (164), Expect = 8e-31 Identities = 1068/1702 (63%), Gaps = 55/1702 (3%) Strand=Plus/Minus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 565642 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 565583 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | |||| | ||| || | |||| | ||| | | || || ||| Sbjct 565582 ATGCTGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 565523 Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 118004 || |||||| || || || || ||||| | |||| ||| || || ||| Sbjct 565522 TCAATGAAGGCACCACGGTCAGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 565466 Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064 ||||||||| |||| || ||| || || | ||||| | ||| || ||||| || Sbjct 565465 CACACAGTCTTGTACAGAGCCTTGATCTCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 565406 Query 118065 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 565405 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 565349 Query 118122 AGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 118178 ||||||| |||| || |||||||| ||||| || || ||| || | Sbjct 565348 AGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 565292 Query 118179 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTG 118238 | ||||| |||| ||||| ||||||||||| || ||||| || | || || | || Sbjct 565291 TGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTA 565232 Query 118239 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 118298 ||| || ||||| || || | ||| || ||||| |||| ||| | | | | Sbjct 565231 CTGGCGGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 565172 Query 118299 TCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 118356 || ||| | |||||||| | | | || | || | | |||||| || |||| Sbjct 565171 TCTCGGAGGGGTTCCCAGTCCCAAAGGTCAGAG--GGCTTGACATTCCACATGTCGAACT 565114 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 |||| ||||| | || || || || || | || || || || || || ||| | Sbjct 565113 GGAGAATACCCTCAGAGGCAGGGGAGCCTTTGAAGGTGGAGTAGGGACCTTCCTCCTTAG 565054 Query 118417 CCAATT-CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 | | || | || | | ||||| ||||| || || || || || || | ||| Sbjct 565053 CGAGTTGCACAGATGTAGTA-AGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTC 564995 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||||| || ||||| | | ||| || || |||| || ||| Sbjct 564994 AGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGA 564935 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595 ||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 564934 CCTTGCACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACA 564875 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 || || || ||||| | | | || | ||| | ||||| | |||| || Sbjct 564874 GGGTAGTGGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCG 564815 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCG 118712 || ||||| | | | || | || || ||||||| ||| | ||| || | Sbjct 564814 TGCAGCTTCTTGAAGTCGTA---GCAAGCATCTTCATAGTTGATGAAAGAAGGCAGAGAC 564758 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 | || || || || || |||| | |||||| | ||| || || || || ||| Sbjct 564757 AAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTG 564698 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 |||| ||| || || ||||| || | ||||||||| || ||| || || | Sbjct 564697 CACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGA 564638 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 118892 |||||||| |||||| | || | || ||||| || |||| || ||||| || | ||| Sbjct 564637 TCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAA 564578 Query 118893 A-CATCGGCAGC--TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAG 118949 | | || | ||| || | | | ||| | || |||| |||||||||| ||| Sbjct 564577 AGCTTCTG-AGCCTTGATAGACTTGCGACCCTTACCCTCTCT--CTCGTACTTTTCGTAC 564521 Query 118950 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GGGCAGAA 119008 || || ||||| || ||||| | || | || || || || || | ||||| | Sbjct 564520 AGAGCCTCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTAGGGCACAT 564462 Query 119009 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 119068 ||||| ||||| || ||| || ||||||||||| || || |||||||| || || Sbjct 564461 GAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGC 564402 Query 119069 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 119128 |||| || || ||| ||| | || || | || || || || | || | || Sbjct 564401 TAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 564342 Query 119129 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG--- 119185 || | || || |||||||| || || ||||| | |||| | || | | || Sbjct 564341 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACC---AGGTCGCTT 564285 Query 119186 ---ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGAT 119242 |||| |||||| || || | |||||| ||| || ||||| ||||| |||| ||| Sbjct 564284 GTTACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGAT 564225 Query 119243 ACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGG 119300 ||| | ||| ||||| || || ||| || ||| | | |||| | || |||| Sbjct 564224 ACCGTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCC--AGTGGCACGGATTCGGTGG 564167 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 || || |||||||| || ||| ||| || || || || |||| | || Sbjct 564166 GCGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCG 564107 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 ||||| ||||| || ||| |||| | | | |||||||| || | |||||| Sbjct 564106 TAGATACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGC 564047 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACA 119478 || ||||| |||||||| | ||| || | || || ||| | | |||| |||| Sbjct 564046 TGTGGAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGA--AGAACTTGCTTGACA 563989 Query 119479 TCTTGTCGTAGGTCTCCAAGAC 119500 | || ||| ||||||||||| Sbjct 563988 TGAGGTTGTATGTCTCCAAGAC 563967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433151433400