Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq77 363 2e-95 seq8 105 7e-18 >seq77 Length=567169 Score = 363 bits (402), Expect = 2e-95 Identities = 1132/1731 (65%), Gaps = 45/1731 (3%) Strand=Plus/Minus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||| | Sbjct 565638 GTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGC 565579 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | |||| ||| | |||| || |||| |||||||| ||||| ||||| || | Sbjct 565578 TGGTGATCTTGCCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGATCAA 565519 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 || | ||||| ||||| || ||||| | | ||| || | ||||||||| | | Sbjct 565518 TGAAGGCACCACGGTCAGCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 565459 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425 || ||| | ||||| | ||| | |||||| | | ||| | | | |||| Sbjct 565458 TCTTGTACAGAGCCTTGATCTCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 565402 Query 78426 TCGCA-CAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCC 78481 | || |||| | | ||||| || | | ||| || || | ||||||| Sbjct 565401 TATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 565342 Query 78482 GGA----CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537 || ||||| |||| | | ||||||||| || ||| ||||| ||||| Sbjct 565341 TGAGAAGCCAGG----GGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAG 565286 Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCT-CGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596 ||||||| ||||| ||||| ||||| | ||||||| || | ||||| | ||| ||| Sbjct 565285 ATGTTGGAGGTGTAAGGCTC-AAAGCATTCGTTGTTGCCAAGAATCTGCGAGGTACTGGC 565227 Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT 78656 ||| ||||| || || || || ||| || || | ||| || ||||||| || | Sbjct 565226 GGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCG 565167 Query 78657 TAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710 ||| | |||||||| ||| | | || ||||||||| || || || Sbjct 565166 GAGGGGTTCCCAGTCCCAAAGGTCAGAGGGCTTGACATTCCACATGTCGAACTGGAGAAT 565107 Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770 |||||| || || || || || ||||| || ||| | || |||||||| ||||||| Sbjct 565106 ACCCTCAGAGGCAGGGGAGCCTTTGAAGGTGGAGTAGGGACCTTCCTCCTTAGCGAGTT- 565048 Query 78771 GCATGACTCGAGCA-GGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGC 78829 ||| | || | |||| |||||||| | | ||||||||| |||||| ||||| | Sbjct 565047 GCACAGATGTAGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCAC 564988 Query 78830 GCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGA 78889 | |||| | || || | | || ||| | |||| |||| || || || || | Sbjct 564987 GAGCCTCAGGAGACTCAAAGGGCATGCGGAGGGCAAGGAAGGCATCAGCAAGACCTTGCA 564928 Query 78890 CGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAA 78949 | || | | | || |||||||| ||||||||||| || || ||| | | | ||||| Sbjct 564927 CACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTACGAGCCTCTTGGACAGGGTAGT 564868 Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009 ||| ||||||| ||||| || || || || |||| ||||||| || | Sbjct 564867 GGTTGACGTCGATGATCTTGTTCAAATTGCGGACAACAACTTGAGTGACCTCGTGCAGCT 564808 Query 79010 TGGCGAAATCAAA---ATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCA 79063 | ||| || | | || ||| | |||||||||| || || ||| || || | Sbjct 564807 TCTTGAAGTCGTAGCAAGCATCTTCATAGTTGATGAAAGAAGGCAGAGACAAGGAGGCAA 564748 Query 79064 GGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123 ||||||| || || ||| || ||| | || ||||| || ||||||| || | Sbjct 564747 GGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCACAGGTTGG 564688 Query 79124 ACGACTT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTA 79181 | ||| |||||| || | |||||| ||||||||||| || ||| |||||||| Sbjct 564687 AG--CTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGATCCTTGTA 564630 Query 79182 GCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCG 79241 | |||| | || | |||||||| ||| || |||| | ||| ||| | | | | Sbjct 564629 GAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTG 564570 Query 79242 GGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301 ||| || | ||| | ||||| | ||||| | ||||| | | || Sbjct 564569 AGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAA 564510 Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361 | || || ||| || | ||||| ||||| |||| |||||||| || ||| || Sbjct 564509 TTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTC 564450 Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421 ||| |||| || || |||||| || || |||||||| || || ||| ||||| Sbjct 564449 GCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGCTAAGAACAGGTC 564390 Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481 || || | |||||| | || |||||| || || || || || || | || ||| Sbjct 564389 ACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTC 564330 Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541 ||||||||| ||||| || ||||||||||| | ||| |||||| || ||||||| Sbjct 564329 GGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTTACCACCCTGGTC 564270 Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601 ||||| || || ||||||||||| || || |||||||| ||||| |||| || || Sbjct 564269 AACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTACC 564210 Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCG--AGCAGTGGATTCCGATG 79659 || || ||| ||| | || | || || | |||| | || | || || Sbjct 564209 ATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TTCGGTGGGCGTTCAAGCCAATA 564152 Query 79660 CCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATC 79719 || || | | |||||| || || || ||||| || |||||||| || || || Sbjct 564151 CCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGATACCATCAATG 564092 Query 79720 GAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCG 79779 ||| ||||||||| | || |||||||| || | ||| || | ||||||||| Sbjct 564091 CTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTGGAGTACCGGCG 564032 Query 79780 TTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT--TTGGCTCATCAGATCGTACGTCT 79837 ||||| | || || | || || ||||||||||| ||| ||| || | ||| |||| Sbjct 564031 TTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTG--ACATGAGGTTGTATGTCT 563974 Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || ||| ||| | ||||| || ||| || || ||||| ||||||| Sbjct 563973 CCAAGACACGCTCAATATCGTCACCCCAGATTCCAACAGCGACTCGCATGA 563923 Score = 340 bits (376), Expect = 2e-88 Identities = 913/1377 (66%), Gaps = 32/1377 (2%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||||||||| || || ||| || ||||| | ||| ||| ||||||||| Sbjct 563923 TCATGCGAGTCGCTGTTGGAATCTGGGGTGACGATATTGAGCGTGTCTTGGAGACATACA 563982 Query 19176 ACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACG 19234 |||| ||| | || ||||||||||| || || | || || | |||||||||||||| Sbjct 563983 ACCTCATGT-CAAGCAAGTTCTTCACTCATGCAAGCCCCACTTTATTCAACGCCGGTACT 564041 Query 19235 AACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGC 19294 | || ||| | || || ||||| || | ||||||||| ||||||||||| || Sbjct 564042 CCACAGCCTCAGCTTTCATCATGCTTCCTTGTTGATATGAAGGAGGACAGCATTGATGGT 564101 Query 19295 ATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATC 19354 |||||||| || ||||| || || || |||||| | | || ||||| || | Sbjct 564102 ATCTACGATACCCTCAAAACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTG 564161 Query 19355 CACTGCT--CGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG 19412 || | ||||| ||| | | ||| | ||| || || || || || Sbjct 564162 AACGCCCACCGAAT--CCGTGCCACTGGCTCTTACATCGCCGGTACTAATGGTACTTCCA 564219 Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||||||||| || ||||| || || ||||||||||| || | ||||| ||||||| | Sbjct 564220 ACGGTATCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTTGACCAGGGTG 564279 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | ||| || || | |||||||||||||| |||||||||||||| |||||| | | Sbjct 564280 GTAACAAGCGACCTGGTGCCTTCGCCATCTACCTTGAGCCATGGCACGCCGACGTCTTCG 564339 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | ||||| || || || |||||| ||| | |||||| | ||| ||| ||||| ||| Sbjct 564340 AGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGTTCT 564399 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 || | ||||| || || || |||||| || || |||| ||| |||||| | Sbjct 564400 TAGCTCTTTGGATCCCTGATCTTTTCATGAAGCGTGTCGAGAGAAACGGCGAATGGACTC 564459 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712 | |||||||| |||||||||||||||| | ||| |||||| || | || | | Sbjct 564460 TCATGTGCCCTAACGAATGCCCTGGCCTTGCTGACTGCTACGGTGACGAATTTGAGGCTC 564519 Query 19713 TGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTC 19771 ||||| | |||| || || || || ||| || ||| | | | | Sbjct 564520 TGTACGAAAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAGGCTCAGAAGCTT 564578 Query 19772 TGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGA- 19830 ||| || | | || | |||| |||||||| | || | |||| ||||||||| Sbjct 564579 TGGTACGCCATTCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATGCTCTACAAGGAT 564638 Query 19831 CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCTG 19888 | | || | || |||| || || |||||| | || | ||| ||| ||||||||| Sbjct 564639 CACTGCAATCG-CAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAG--CTCCAACCTG 564695 Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948 || ||||| ||||| || | | || || ||| || || || || || || ||| Sbjct 564696 TGCACTGAGATCATTGAATACTGCGCCCCTGATGAGGTCGCTGTTTGCAACCTTGCCTCC 564755 Query 19949 CTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002 ||| ||||| ||||| ||| | | | | || |||||| || || || Sbjct 564756 TTGTCTCTGCCTTCTTTCATCAACTATGAAGATGCTTGCTACGACTTCAAGAAGCTGCAC 564815 Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062 ||||| || | || || || ||| |||| ||||||| ||| ||||| Sbjct 564816 GAGGTCACTCAAGTTGTTGTCCGCAATTTGAACAAGATCATCGACGTCAACCACTACCCT 564875 Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122 | | | ||| || || || ||||| ||||| || || | | || || || || Sbjct 564876 GTCCAAGAGGCTCGTAACAGCAACATGCGTCACCGACCCATTGGTCTTGGTGTGCAAGGT 564935 Query 20123 CTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTC 20182 || || || | ||| | ||| || | | || || ||| |||| || ||||| Sbjct 564936 CTTGCTGATGCCTTCCTTGCCCTCCGCATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTG 564995 Query 20183 AACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC-TCCTGGAATCGTGCGAACTCGC 20241 |||||| ||||||||| || | |||||||| |||| | || | |||| ||||||| Sbjct 564996 AACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACTACATCTGTGC-AACTCGC 565054 Query 20242 CAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCA 20301 || ||||| || || ||| || ||||| || || || || || |||||||| ||||| Sbjct 565055 TAAGGAGGAAGGTCCCTACTCCACCTTCAAAGGCTCCCCTGCCTCTGAGGGTATTCTCCA 565114 Query 20302 GCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTTG 20354 | ||||||||| |||| |||| || | | ||| | ||||| | | Sbjct 565115 GTTCGACATGTGGAATGTCAAGCCCTCTGACCTTTGGGACTGGGAAC-CCCTCCGAGAGG 565173 Query 20355 AGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGA 20414 | ||||||| ||||| | |||||| ||||||| || || ||||| |||||| | Sbjct 565174 ATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTTGCTCCTATGCCTACCGCCAGTA 565233 Query 20415 CCGCCCAGATCATGGGGAACAACG-AGGCTTTCGAGCCGTACACGACCAACATCTAC 20470 || | ||||| | || ||||||| | ||||| ||||| ||||| ||||||||||| Sbjct 565234 CCTCGCAGATTCTTGGCAACAACGAATGCTTT-GAGCCTTACACCTCCAACATCTAC 565289 >seq8 Length=2097948 Score = 105 bits (116), Expect = 7e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| || ||||| | |||||||| ||| || || ||||||||| || | || Sbjct 771942 TTTGCTCAGCGTCTTGTTGCTTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 771883 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | | || ||||||||||| ||||||||||||||||| || ||||| || || |||||| Sbjct 771882 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGAGCTTTTCTAACGAG 771823 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCA 60118 || ||||| || || ||||| || || Sbjct 771822 CTCATTTCTCGTGATGAGGGTCTTCA 771797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522983011600