Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31] 265 sequences; 36,526,733 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq227 167 5e-36 seq92 161 2e-34 seq36 125 2e-23 seq77 86.0 1e-11 >seq227 Length=372751 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | |||||| |||||||| || |||||||| || || ||||| Sbjct 137118 ACGAAGGCGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 137177 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || |||||||| || || |||||||| || || ||||| || || | || Sbjct 137178 GCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATACC 137237 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| || |||||||| || || ||||| || Sbjct 137238 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAG 137297 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| |||||||| ||||| || || | |||||| Sbjct 137298 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 137339 >seq92 Length=1659281 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| ||||| ||||| || |||||||| || || | ||||| Sbjct 963197 ACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 963256 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| ||||| || | || || || |||||||| | || Sbjct 963257 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCC 963316 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| ||||| || ||||||||||| || ||||||||||| Sbjct 963317 CTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGATGACTCAACCTCGAG 963376 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | ||||| || || | |||||| Sbjct 963377 GGTAATAGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 963418 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| |||||||| || || || || |||||||| || || | ||||| Sbjct 962688 ACGAAGACGAAGGACCAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGT 962747 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| ||||| || | || || || |||||||| | || Sbjct 962748 TCGACCGTCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCC 962807 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| ||||| || ||||||||||| || || |||||||| Sbjct 962808 CTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAG 962867 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | ||||| Sbjct 962868 GGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 962909 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| ||||| ||||| || || ||||| || || | ||||| Sbjct 962916 ACGAAGGCGGAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGT 962975 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| ||||| || | || || || |||||||| | || Sbjct 962976 GCGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGATCAGGAGGGATGCC 963035 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| ||||| ||||| || || ||||| || Sbjct 963036 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGATGACTCGACCTCAAG 963095 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 || || ||||| || || | ||||| || Sbjct 963096 GGTAATAGTCTTGCCAGTCAAGGTCTTGAC 963125 >seq36 Length=1468341 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | ||||| || ||||||||||| |||||||| Sbjct 1090379 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 1090320 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || || || || || | || ||||||||||||||||| || || || ||| Sbjct 1090319 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1090260 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| || || |||||||| ||||| ||||| ||||| || ||||| || || Sbjct 1090259 ATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1090201 >seq77 Length=567169 Score = 86.0 bits (94), Expect = 1e-11 Identities = 182/269 (68%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144 |||| |||||||||||||||||| | |||| || ||| ||||| ||||| || Sbjct 564673 CCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAG-TG--ATCCTTGTAGAGCATGAAAGGG 564617 Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204 |||| ||| | || ||| | |||||| | |||||||| ||| || || || | Sbjct 564616 TTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAAGCTTCTGAGCCTTGATAGAC 564557 Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264 || | || || || |||||||||||| ||| || |||| ||||| || ||| Sbjct 564556 TTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAATTCGTCACCGTAG 564497 Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324 ||| | || || || || || ||||| | |||| |||| | |||| | || Sbjct 564496 CAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACATGAGAGTCCATTCGCCGTTTCTCTCG 564437 Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCA 178353 || || |||||||| || |||| | |||| Sbjct 564436 ACACGCTTCATGAAAAGATCAGGGATCCA 564408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148064316725