Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20asiaticum_20[genbank_20GCA_5F001717845.1_202016-08-31]
265 sequences; 36,526,733 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq77 172 8e-38
seq8 127 3e-24
>seq77
Length=567169
Score = 172 bits (190), Expect = 8e-38
Identities = 602/926 (65%), Gaps = 18/926 (2%)
Strand=Plus/Minus
Query 76280 GATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCAT 76339
|| || || || ||||| || ||||||| || | |||| || ||||| |||||
Sbjct 564754 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCGCAGTATTCAATGATCTCAGTGCAC 564695
Query 76340 AGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAGTC 76398
|| || | ||| || ||||| || | |||||||||||| || || ||| ||
Sbjct 564694 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGATTGCAGTGA-TC 564636
Query 76399 CTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 76458
||| || || | || || |||| || || |||| | || | ||| | | ||| |
Sbjct 564635 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGAATGGCGTACCAAA- 564577
Query 76459 GACTCT-AGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTCATATTGT--GTATA 76512
| ||| ||| || || ||| ||| | ||| |||||| || || | | ||| |
Sbjct 564576 GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTTTCGTACA 564520
Query 76513 TAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACAT 76572
| || |||||||| || || | ||| | | ||||| ||||| || || |||||
Sbjct 564519 GAGCC--TCAAATTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTAGGGCACAT 564462
Query 76573 CAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGC 76632
| | ||| || || | | || || || ||||| || |||||||| ||||| |||||
Sbjct 564461 GAGAGTCCATTCGCCGTTTCTCTCGACACGCTTCATGAAAAGATCAGGGATCCAAAGAGC 564402
Query 76633 AATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAA 76692
| || || || || | | || || || || |||||| ||||| |||||
Sbjct 564401 TAAGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 564342
Query 76693 CTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATT 76752
||| | | || | |||||||| || || || || || | |||| ||||| || ||
Sbjct 564341 CTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAGATGGCGAAGGCACCAGGTCGCTTGTT 564282
Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812
||| ||||| || | || | |||||||| || | || | || ||| |||| || ||
Sbjct 564281 ACCACCCTGGTCAACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACC 564222
Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872
||| || |||||||| || || | || ||| ||| ||||| || | | |
Sbjct 564221 GTTGGAAGTACCATTAGTACCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGGGCGT 564163
Query 76873 T-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGA 76931
| | ||| || || || ||||| || || || | ||||| ||| | || || ||||
Sbjct 564162 TCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTTTTGAGGGTATCGTAGA 564103
Query 76932 TGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAA 76991
| || || || || || ||| |||| | || ||| || || || | ||| | ||
Sbjct 564102 TACCATCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGAAAGCTGAGGCTGTG 564043
Query 76992 CAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGAT 77051
||| || || || || || || || |||||||||||| | || || | || |
Sbjct 564042 GAGTACCGGCGTTGAATAAAGTGGGGCTTGCATGAGTGAAGAACTTGCTTGACATGAGGT 563983
Query 77052 TGTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATC 77110
||||||| || | || || ||||| || || |||| |||||||| |||||
Sbjct 563982 TGTATGTCTCCAAGACACGCTCAATATCGTCACCCCAGA-TTCCAACAGCGACTCGCATG 563924
Query 77111 AACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCC 77170
| ||||||||| || || || || | || | || | | |||||||||| | |
Sbjct 563923 ATCATATGCTGCGGGCGCTCAGCAATTTTGCCGTCAATCTGTAGCAAGTATGATCTGGAC 563864
Query 77171 AAAGTTTTAAAACCAAAATAGTTGTA 77196
|| ||| || ||||||||||||||
Sbjct 563863 AAGGTTCGGAAGCCAAAATAGTTGTA 563838
>seq8
Length=2097948
Score = 127 bits (140), Expect = 3e-24
Identities = 366/559 (65%), Gaps = 8/559 (1%)
Strand=Plus/Plus
Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688
||| ||||| || ||||| || ||||| | | ||| | ||||||||||| | ||
Sbjct 771781 ACAGGCAAAGTCGGTGTGAAGACCCTCATCACGAGAAATGAGCTCGTTAGAAAAGCTCAG 771840
Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748
|||||||| || |||||||| |||||||| || || | || || | || |||||
Sbjct 771841 ACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 771900
Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---G 46805
|| || || || || || || || ||||| | || | | | | | |||| |
Sbjct 771901 GATACCCTCAACGGCAGCAAAAGCAACAAGACGCTGAGCAAAGGTAGAGTTCTTATCCTG 771960
Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865
||||| | |||||||| ||||| || | ||||| || || || | || ||
Sbjct 771961 GATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATAGTGTCAACGGCGTT 772020
Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925
||||| | | | || || || | || ||||| || | ||| || |
Sbjct 772021 GAAGAGGTATGTACGCTGGGCAGGGTCCTTGATGTAGGTATCGATGAGGAGAGAGTATGT 772080
Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985
||| || || ||||| || || ||||| || || || || |||| || || | ||
Sbjct 772081 TTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGAGCCTCGGGGAT 772140
Query 46986 CTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGCAG 47044
||| ||||| | ||||| ||| |||| ||||||||| || || || || ||||
Sbjct 772141 CTGGACCTCGCCGCTGAATCGCTCA-ACAAGATTCTCATTGACGATGCCGTCGGAGGCAG 772199
Query 47045 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCC 47101
| || || || | | || || || |||| || || | ||||| | || ||||
Sbjct 772200 CGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAATCGGTTGTTCC 772259
Query 47102 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTT 47161
|||| | || ||| || || | ||| | || |||||||||||||| || |||||||| |
Sbjct 772260 AGTCGTGGAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAGGCCTCTGCCT 772319
Query 47162 TTTTATACATATTCCATAT 47180
| || ||||| | ||| ||
Sbjct 772320 TCTTGTACATTTGCCAGAT 772338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712932038404800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |