Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq19 122 2e-22 seq10 84.2 5e-11 >seq19 Length=533231 Score = 122 bits (134), Expect = 2e-22 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 |||||||| | ||| ||| | || ||| ||| |||||||||| | | || ||| Sbjct 112461 AGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTGCTTGGCATGAATTCCAACCTGATGA 112520 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 |||||||| || || || || ||||| | | || || || || ||||||| || | Sbjct 112521 AGCAGTACATTGAGTTTGTCGCTGACCGTCTACTCGTCGCTCTCGGCAACGAGAAGGTTT 112580 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| | | |||||||| | || |||||| ||| || ||| || |||||||||| Sbjct 112581 ACAAGGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACT 112640 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||| ||||||||| |||||| |||| | ||||||| Sbjct 112641 TCTTCGAGAAGCGTGTCGCTGACTACCAGAAGGCTGGTGT 112680 >seq10 Length=882988 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916 |||||| || |||| ||| |||| || |||||||| || || || || || | || Sbjct 578858 GGGGAAACCCTCAACCTGTTCGTTGTTGATGGCGCGCATAAGAGTGGACTTTCCGGAACC 578799 Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAG 319976 ||| || || || |||||||| || | || || || ||| || | || | ||| || Sbjct 578798 GTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTGAGGCGGAGATGGGTCTGGTTGAG 578739 Query 319977 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 |||||| || ||||||| || ||||| || ||| | || ||||||||||| Sbjct 578738 AAGAATCTTGGCACCATAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 578685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822875070290