Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq19 93.3 4e-14 >seq19 Length=533231 Score = 93.3 bits (102), Expect = 4e-14 Identities = 175/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| || ||||| || || || ||||| ||||||||||||||||| | || Sbjct 112080 TCGGAGTGAATATTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGATC 112021 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || || ||||| || | |||||||| || || || || ||| ||||| Sbjct 112020 TGGACCTCGCCGCTGAATCGCTCAACTAGGTTCTCGTTGACAATGCCATCAGAAGCAGCG 111961 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGA---ATATGCCAA 16678 || || || | ||||| ||||| | | ||||||| || ||| | | |||| Sbjct 111960 AAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCGTCAGTGGTCAGACGGTTGTTCCAA 111901 Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738 || | | ||| ||||| | ||| | || || | ||||| || |||| | ||||| Sbjct 111900 TCGTGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAAGAAGCCTCGGCCTTC 111841 Query 16739 TTATACATTTTCCAAAT 16755 || ||||||| ||| || Sbjct 111840 TTGTACATTTGCCAGAT 111824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413869407560