Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq66 95.1 3e-14 >seq66 Length=1847925 Score = 95.1 bits (104), Expect = 3e-14 Identities = 239/358 (67%), Gaps = 14/358 (4%) Strand=Plus/Minus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || |||| ||||| | ||||| | ||| | | ||||| ||||| || ||||| | Sbjct 1063073 GCCATTGTCTACGACCGTGATTTCCAATACCAATACTTTGGCTTCAAGACATTGGAGCGA 1063014 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || |||||||| ||||| |||||||| || ||||| |||||||||| | ||||| Sbjct 1063013 TCATACCTCCTCAAGATTGACGGCAAGATTGTCGAACGTCCTCAGCACATGATCATGCGT 1062954 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG 248970 ||| || | || || ||||| || ||| | || | ||||| |||| | ||| Sbjct 1062953 GTGTCTATTGGTATATGGGGCGATGATATTGAGCGTGTCTTGGAGACATACAACCTCATG 1062894 Query 248971 ---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTA-CCGTCAA 249026 || | || | || ||||| | || || ||||||||||| |||| || |||| Sbjct 1062893 TCCAGCAAGTTCT---TCACCCATGCTTCCCCCACCCTCTTCAACGCTGGTACCCCTCAA 1062837 Query 249027 CAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTA 249086 | ||||| || ||||| | ||| ||| | || ||| | ||||| || || Sbjct 1062836 C-CCCAGCTTTCTTCATGCTTCTTGGTTGATATGAAGGAGGACAGCATTGACGGTATCTA 1062778 Query 249087 TGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTC 249141 ||| || || | |||| || | |||||| || | || || || || |||||| Sbjct 1062777 TGATACCCTCA---AGACCTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGTCTC 1062723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765258116544