Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq66 96.9 7e-15 >seq66 Length=1847925 Score = 96.9 bits (106), Expect = 7e-15 Identities = 174/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||||| || || || ||| || |||||||| ||||| |||||| Sbjct 1062733 CCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGATACCGTCAATG 1062792 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910 || || || | | | | | |||||| || ||||| |||||| ||| | | ||| Sbjct 1062793 CTGTCCTCCTTCATATCAACCAAGAAGCATGAAGAAAGCTGGGGT-TGAGGGGTACCAGC 1062851 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || || || ||||||||||||||||| || | | || |||||||| | ||||| || Sbjct 1062852 GTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTC 1062911 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 | |||| | || || || || || | || ||||||||| ||||||| ||| Sbjct 1062912 CAAGACACGCTCAATATCATCGCCCCATATACCAATAGACACACGCATGATCATGTGCTG 1062971 Query 95031 AGGGCGCTCAAC 95042 ||| || || || Sbjct 1062972 AGGACGTTCGAC 1062983 Score = 87.8 bits (96), Expect = 4e-12 Identities = 119/165 (72%), Gaps = 6/165 (4%) Strand=Plus/Plus Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451 ||| || ||||| ||| || |||||||| | |||| ||||||||| || | | ||| Sbjct 1062333 ACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTC 1062392 Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508 || ||| ||||||||||||| ||||||||| |||| ||| || || |||| || Sbjct 1062393 GGCAAGACCAGGGCACTCGTTGGGGCACATGAGGGTCCA---CTCTCCGTTCTTCTCAAC 1062449 Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 | || |||||| || |||| | ||||| || |||| || || Sbjct 1062450 ACGCTTCATGAAAAGGTCAGGGATCCAGAGGGCCAGGAACAGGTC 1062494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582947639265