Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq19 284 2e-71 seq66 140 5e-28 >seq19 Length=533231 Score = 284 bits (314), Expect = 2e-71 Identities = 588/850 (69%), Gaps = 35/850 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | ||| ||| | ||||| Sbjct 111824 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGATCTC 111883 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AGTTT---AT 125134 |||||||| || |||||||| | | ||| |||| ||||| |||| |||| || Sbjct 111884 TCCAAGGATCTCCACGATTGGAACAACCGTCTGACC---ACTGA-CGAGCAGTTCTTCAT 111939 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || ||||| | |||||||| || | || ||||| || |||||||| || || ||||| Sbjct 111940 CTCTCACATCCTTGCCTTCTTCGCTGCTTCTGATGGCATTGTCAACGAGAACCTAGTTGA 111999 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252 |||||| ||| | || || |||| ||| ||||| ||||||||||||||| Sbjct 112000 G-CGATTCAGCGGCGAGGTCCAGATCCCTGAGGC-TCGATGCTTCTACGGATTCCAAATC 112057 Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT 125312 ||||| ||||| | ||||| || | || || || ||||||| ||||| || Sbjct 112058 ATGATGGAGAATATTCACTCCGAGACCTATTCCCTGCTCATTGACACCTACATCAAGGAG 112117 Query 125313 CC-GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371 || || | ||| | ||||| ||||| | || || | || | || || || || Sbjct 112118 CCTGCCCAGCGAACCTAC-CTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAA 112176 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 |||| | |||| ||||| |||||| | ||| | | ||| | | ||| | | ||||| Sbjct 112177 GGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAACGTCTGGT 112236 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 || ||||| ||||| ||||| |||||||| ||| ||||| ||||||| ||||| Sbjct 112237 TGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 112296 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 ||||||||| || ||||||||||| |||| | |||||| | || ||||| || || Sbjct 112297 CAAGAAGCGTGGCCTCATGCCCGGTTTGACCTTCTCCAACGAGCTCATCTCTCGTGATGA 112356 Query 125552 GGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCT-GCGTCCCGAGTGCA 125610 |||||| ||| ||||||||| | | || ||| | | |||| | || |||| Sbjct 112357 GGGCCTTCACACCGACTTTGCC-TGC--CTTCTTCACTCCCATCTCAAGGGCC--GTGC- 112410 Query 125611 GATCCAGC-GATGA-AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668 | | ||| ||||| ||| ||||| |||| |||||||| | || || || || Sbjct 112411 TAGCAAGCAGATGATCCAGGACATCA--TTTGT----GATGCCGTCACCATTGAGCAGGA 112464 Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728 ||| || || || | || || | || |||||||||| | ||| || ||| | Sbjct 112465 GTTCCTCACTGAGGCTCTCCCCTGTGCCCTGCTTGGCATGAATTCCAACCTGATGAAGCA 112524 Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTA 125785 |||||| |||||||| || || |||||||| || | ||| || ||| |||| Sbjct 112525 GTACATTGAGTTTGTCGCTGACCGTCTACT---CGTCGCTCTCGGCAACGAGAAGGTTTA 112581 Query 125786 CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTT 125845 ||| |||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 112582 CAAGGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTT 112641 Query 125846 TTTCGAGAAG 125855 ||||||||| Sbjct 112642 CTTCGAGAAG 112651 >seq66 Length=1847925 Score = 140 bits (154), Expect = 5e-28 Identities = 311/463 (67%), Gaps = 14/463 (3%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| || || || || || || ||| | || ||||| | || ||| Sbjct 1062623 CGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCT 1062564 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || || || || | || | || || ||| || || |||| Sbjct 1062563 TGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 1062504 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC--- 97040 || ||| | ||| |||| || |||||| | || || | ||||||||||| || Sbjct 1062503 CGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAG 1062444 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 || |||| | | |||| ||| ||||||||| || || || ||||| |||| ||| Sbjct 1062443 AAGAACGGAG---AGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGC 1062387 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 | || ||||||||||||||| ||| | |||||| |||| | || | | Sbjct 1062386 TACGGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAG----AGGGAAGGTAAGGGTCG 1062331 Query 97161 CGAGTCGATGCACG---AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 | |||| || | | |||| || ||| | |||||| | ||| ||| ||||| || Sbjct 1062330 CAAGTCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGG 1062271 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 || || | ||| || ||||||||| || || ||||| |||||||| || | || Sbjct 1062270 AAACCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGG 1062211 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||||| |||| ||||||||||| || || | |||||| Sbjct 1062210 CACCATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTAC 1062168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058431151080