Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 1e-11 >seq12 Length=2665234 Score = 84.2 bits (92), Expect = 1e-11 Identities = 201/295 (68%), Gaps = 18/295 (6%) Strand=Plus/Minus Query 25308 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 25367 |||||||| ||||||| | || |||||| ||||| || | |||| | ||| |||||| Sbjct 2467536 TGAGGGTCATAACCCTTGACGGTGAAATCTTCTGCTTTCCAACCGTCAATGCT-TCCACC 2467478 Query 25368 CTCCTGTTTATC-------CTC-AG-TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGA 25418 || ||| || ||| || | |||||| | || ||||| | ||| || || Sbjct 2467477 CT----TTTCTCGAGAAATCTCTAGCTCTGGGAA-GTCTCGCGGCTCGCGCTCCAGTTGG 2467423 Query 25419 GTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAA-A 25477 |||| || | || ||||| || ||||| || ||||| || |||| | ||| || | Sbjct 2467422 ATCTTAAGAGCATCAACGTGGTCGAGGTACACATGAGCATCACCCATAACATGGGTAAGA 2467363 Query 25478 CTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGC 25537 || ||| || | || | ||||| || | ||||| || | || ||| || || Sbjct 2467362 CT-TCCAGGAACCAGGTCACAAACGTGCGCAAGCATGTGTGTCAATAGGGCGTAACTAGC 2467304 Query 25538 GATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 ||||| ||||| || |||| |||||||| | ||||||||||| | |||||| Sbjct 2467303 AATGTTGAAGGGAACACCGAGACCCATGTCGCAA-GACCTCTGGTACAACTGACA 2467250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137255929559