Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3 102 7e-17 >seq3 Length=1379917 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| ||||| || | ||| || ||||||| |||| ||||||||||| || || Sbjct 686703 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGACCGTCCTCCAGCTGCTTACCA 686762 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | ||||| || || || ||||| || ||||| | ||| || ||| Sbjct 686763 GCGAAGATAAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGAATCTTGCTCTTC 686822 Query 94931 ACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| | | | |||||| || || ||||| |||| ||||| || |||||||| ||||| Sbjct 686823 ACGTTGTCAATAGTGTC-GCTTGATTCGACCTCAAGGGTGATAGTCTTTCCAGTGAGAGT 686881 Query 94990 TTTCACAAAGATCTGCAT 95007 || || || |||||||| Sbjct 686882 CTTGACGAAAATCTGCAT 686899 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||||||||| ||| || ||||| || | ||| || || | || ||| | |||| Sbjct 686919 ACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAG--AAAGGGTTCGTCCGTCCT 686976 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || || || || | ||||| | || || || || ||||||||||| || ||||| | Sbjct 686977 CTAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCT 687036 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || ||| || | ||| ||||||| ||||| || | |||||||||| Sbjct 687037 GGATCTTGCTCTTCACATTGTCGATGGTGTCAGATGACTCGACTTCCAATGTGATGGTTT 687096 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || || || ||||| ||||| Sbjct 687097 TTCCGGTAAGGGTCTTGACGAAGATTTGCAT 687127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290734897880