Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq19 104 4e-18 seq5 104 4e-18 >seq19 Length=533231 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||||| ||| | | ||||| |||||||| || || |||||||| ||||| Sbjct 385646 GCCAAGCGTCATCGCAAGATTT-TGCGAGACAACATCCAGGGTATTACCAAGCCCGCTAT 385588 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||||||||| || ||||||||| | |||| Sbjct 385587 CCGACGTCTCGCTCGTCGTGGAGGTGTCAAGCGTATTTCTG 385547 >seq5 Length=1292936 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| |||||||| || ||||||||||| ||||| Sbjct 1278217 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 1278275 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||| ||||| ||||||||| | |||| Sbjct 1278276 CCGACGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATTTCTG 1278316 Score = 89.7 bits (98), Expect = 8e-14 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| ||||||| |||||| || || |||| ||||| Sbjct 1278372 TGATCTACGAGGAGACACGCGGTGTCTTGAAGACCTTCCTTGAGGGTGTCATCCGTGATG 1278431 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| || || || | ||| | ||||||| Sbjct 1278432 CCGTCACCTACACCGAGCACGCCAAGCGAAAGACAGTGACATCTCTCGATGTTGTCTATG 1278491 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | | || || |||||||| | |||| ||||| || Sbjct 1278492 CCCTTAAGCGACAAGGCCGCACTCTTTACGGTTTCGG 1278528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075124112519