Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq66 367 3e-96 >seq66 Length=1847925 Score = 367 bits (406), Expect = 3e-96 Identities = 1144/1743 (66%), Gaps = 50/1743 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCG--G 363499 ||||| ||||| || ||||| ||| | |||||||| |||||||||| || | || | Sbjct 1062986 ATTGTCGAACGTCCTCAGCACATGATCATGCGTGTGTCTATTGGTAT--ATGGGGCGATG 1062929 Query 363500 ATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACG 363556 || |||| | | || ||||| || || | || || || | ||||| || | Sbjct 1062928 ATATTGAGCGTGTCTTGGAGACATACAACCTCAT--GTCCAGCAAGT-TCTTCACCCATG 1062872 Query 363557 CCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC 363616 | | || || | | ||| ||||| || | | | || ||| | ||||| ||||| | Sbjct 1062871 CTTCCCCCACCCTCTTCAACGCTGGTACCCCTCAACCCCAGCTTTCTTCATGCTTCTTGG 1062812 Query 363617 TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTA 363676 | | |||||||| || ||| || ||||||| ||| || || |||| ||||| | | Sbjct 1062811 TTGATATGAAGGAGGACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGA 1062752 Query 363677 TTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACA 363733 ||||||||| || || || |||||| | | || | || | | ||||| || | | Sbjct 1062751 TTTCCAAGATGGCTGGTGGTATTGGTCT--CAATGCCCACCGAATCCGTGCCACTGG-CT 1062695 Query 363734 GTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTT 363792 |||||| || || || ||| || || || | ||||| ||||| ||||| || Sbjct 1062694 CCTACATTGCTGGTACCAACGG-TACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTC 1062636 Query 363793 GACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATG 363852 |||| ||||| | ||||| || |||||||| ||||| || || |||||||| Sbjct 1062635 AACAACACTGCCCGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATC 1062576 Query 363853 TATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGA 363912 || || |||||| || || ||| | || ||||| ||||| ||||| || ||| || Sbjct 1062575 TACCTTGAGCCTTGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGT 1062516 Query 363913 AAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATG 363972 || ||||| | || || || || |||||| || || ||| | |||||| ||| ||| Sbjct 1062515 AAGGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATG 1062456 Query 363973 AAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCT 364031 ||||| || ||| || || | ||| | ||| | ||||| |||| || || ||||| Sbjct 1062455 AAGCGTGTTGAGA-AGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCT 1062397 Query 364032 TTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAA 364091 | |||| | ||||| || | || || || ||||| ||||| || ||| || || Sbjct 1062396 TGCCGACTGCTACGGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAA 1062337 Query 364092 GGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151 || ||| ||| | || || |||||||| |||| ||||||| | || | |||| || Sbjct 1062336 GGGTCGCAAGTCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGA 1062277 Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCA 364211 ||| |||| |||| ||| | ||||| ||| | || ||||||||| ||||||| || | Sbjct 1062276 GACCGGAAACCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAA 1062217 Query 364212 CCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCG 364270 ||| || || || | | || | || || || || ||||| || || ||| || || | Sbjct 1062216 CCTCGGCACCATCC-GAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTG 1062158 Query 364271 ACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTA 364330 | ||| || || || |||||||| || | || || || || || | || ||| | Sbjct 1062157 ATGAGGTCGCTGTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTATGATG 1062098 Query 364331 ---CTTT---TGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCG 364384 ||| ||| | || | || || | || | | || | |||| | Sbjct 1062097 AGGCTTGCTATGATTTCAAGAAGCTGCATCAGGTCAGTCAGGTTGTTGTCCGCAACTTGA 1062038 Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATAT 364439 ||||| | ||||| || | || || | | || || || ||| || || Sbjct 1062037 ACAAGATCATCGATGTCAACCACTACCCTGTGCAAGAGGCTCGCAACAGC-----AACAT 1061983 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499 |||||| || || || ||||||||||||||||| || ||||| | ||| | ||||| Sbjct 1061982 GCGTCACCGACCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCT--TGCTCTG 1061925 Query 364500 G--ATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATG 364557 ||| | || || || || || ||| | | || || ||| |||||||||| || || Sbjct 1061924 CGCATGCCCTTCGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATC 1061865 Query 364558 TATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTAC 364616 || || || | ||||| || ||| | ||||| || |||| |||||||| Sbjct 1061864 TACCACGCTGCCCTCACTGCCTCC-GTGCAGTTGGCCAAGGAGGAGGGTCCCTACTCTAC 1061806 Query 364617 TTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCC 364676 | |||| || || || |||| | ||||||| || | ||||| |||| ||| Sbjct 1061805 CTTCAAGGGTTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCC 1061746 Query 364677 ATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAA 364736 || | || ||| ||||||| | || || | ||||||| || |||| || || Sbjct 1061745 TTCCGACCTTTGGGACTGGGAGAGCCTTCGAGAGGATGTTAAGACTCACGGTATCCGTAA 1061686 Query 364737 C--TCC-CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAA 364793 | || ||| || || || ||||| || || ||| | ||||| || || ||||| Sbjct 1061685 CAGTCTGCTCCTT---GCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGTAACAA 1061629 Query 364794 CGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATT 364853 |||||||||||| || | || ||| |||| ||||| || ||| | || || || Sbjct 1061628 CGAGTGCTTCGAGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTT 1061569 Query 364854 TCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAG 364913 | ||| || || | | ||||||||||| |||| || ||||| ||| Sbjct 1061568 CCAGGTTGTCAACCCCTGGTTGCTCAAGGATCTTGTCGACATGGGCTTGTGGTCTGATGC 1061509 Query 364914 CATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA 364973 |||||||||| ||| || ||| ||| |||||| | |||||||| || | || | Sbjct 1061508 CATGAAGAACCGTATTATTTCCGATAACGGTTCTATTCAGAACATCCCCAACATCCCTGC 1061449 Query 364974 AGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATAT 365033 || | ||| || ||||||| || || ||||| ||||| ||| | | | || Sbjct 1061448 CGACGTCAAGGCTCTTTACAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTTGTCCAGAT 1061389 Query 365034 GGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCA 365093 ||| ||||| || |||||||| ||| |||| |||||| | ||| | ||||| | Sbjct 1061388 GGCTGCCGACCGAGGTGCTTTCATCGATCAGTCCCAGTCCCTCAACATTCACATGAAGGA 1061329 Query 365094 GCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGAC 365153 || || | |||| | || |||||| ||| ||| ||||| ||||| ||||| Sbjct 1061328 TCCCACGATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTTGGTCTCAAGAC 1061269 Query 365154 AGG 365156 || Sbjct 1061268 TGG 1061266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352213964906