Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq66 179 5e-40 >seq66 Length=1847925 Score = 179 bits (198), Expect = 5e-40 Identities = 634/980 (65%), Gaps = 24/980 (2%) Strand=Plus/Plus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| || || || || ||||| || ||||||| || | || | || |||||| Sbjct 1062124 GCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCA 1062183 Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866 ||||| |||||| | |||||| || | || | || || ||||| |||||| Sbjct 1062184 GTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAG 1062243 Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926 |||||||| ||||| ||||| || | || || || |||| | || | || || | | Sbjct 1062244 GCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATAC 1062303 Query 62927 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTA--TAGT 62980 || | | || | ||||| || || ||| | ||| ||| || ||||| | Sbjct 1062304 CAAA-GCTTCTGGGCCTTGATG---GACTTGCGACCCTTACCTTCCCTCTCGTACTTCTC 1062359 Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGA 63040 ||| | | || ||||| || || | | | | || ||||| || || | || Sbjct 1062360 GTAGAGGGCC--TCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 1062417 Query 63041 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63100 ||||| | | ||||||||||| | || || || ||||| || || ||||| ||||| Sbjct 1062418 CACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAG 1062477 Query 63101 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63160 || || | || || || | || | ||||| || || |||||| ||||| Sbjct 1062478 AGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCA 1062537 Query 63161 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63220 |||||| | | | ||||| ||||| || || | ||| || || | | | ||||| || Sbjct 1062538 AGGAACTCGAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGGTCGC 1062597 Query 63221 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63280 ||||| || |||||||| | ||| | || ||||| || | || | | ||| |||| | Sbjct 1062598 TTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACA 1062657 Query 63281 ATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTAC 63338 | ||| ||||||||||| ||||| || | || ||| ||| ||||||| || | Sbjct 1062658 ACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGG 1062717 Query 63339 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 63398 |||| ||||| || || || ||||| || || || | || || || | |||| Sbjct 1062718 GCATTG--AGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTAT 1062775 Query 63399 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63458 ||||||| || || || || || ||| |||| | || | || || ||| | ||| Sbjct 1062776 CATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAAGAAAGCTGGG 1062835 Query 63459 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAA 63518 | || || || || || || | ||| || ||||| || || || | || || | Sbjct 1062836 GTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACA 1062895 Query 63519 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG----ATGAATTCCTACTGCG 63574 || ||||| ||||| | | || |||| ||| | || || || | | Sbjct 1062896 TGAGGTTGTATGTCTCCAAGACACGCTCAATAT--CATCGCCCCAT--ATACCAATAGAC 1062951 Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 63634 |||||||| | |||||||||||| | ||| || |||||| || || || | | ||| Sbjct 1062952 ACACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTAT 1063011 Query 63635 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63694 ||| ||||| || || || ||||| || | |||| || || || ||||| | ||| Sbjct 1063012 GATCGCTCCAATGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTCGTAGACAATG 1063071 Query 63695 ACCGAGTTGAGTTTATCCTT 63714 | |||| || | ||||| Sbjct 1063072 GCAGAGTCTAGCTCTTCCTT 1063091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631342606800