Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq19 98.7 2e-15 seq10 93.3 9e-14 >seq19 Length=533231 Score = 98.7 bits (108), Expect = 2e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 243566 TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCA 243625 |||||||||| || | || ||| |||||||| || || || || ||||| | || Sbjct 112497 TTGGCATGAATTCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACCGTCTACTCG 112556 Query 243626 TCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCA 243685 |||| || || | ||||| || ||||| ||| |||||||| | ||| |||||| || Sbjct 112557 TCGCTCTCGGCAACGAGAAGGTTTACAAGGCCACAAACCCCTTCGACTTCATGGAGAACA 112616 Query 243686 TTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 | || ||| || || || ||||||||||| ||||||||| ||| || || Sbjct 112617 TCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGCTGACTACCA 112668 >seq10 Length=882988 Score = 93.3 bits (102), Expect = 9e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240 |||||| || |||| ||| |||| || |||||||| ||||| || || || | || Sbjct 578858 GGGGAAACCCTCAACCTGTTCGTTGTTGATGGCGCGCATAAGAGTGGACTTTCCGGAACC 578799 Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300 ||| || || || |||||||| || | |||||||| || || | || | ||| || Sbjct 578798 GTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTGAGGCGGAGATGGGTCTGGTTGAG 578739 Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||||| || ||||||| || ||||| || ||| | || ||||||||||| Sbjct 578738 AAGAATCTTGGCACCATAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 578685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878827156050