Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq66 219 5e-52 >seq66 Length=1847925 Score = 219 bits (242), Expect = 5e-52 Identities = 963/1508 (64%), Gaps = 51/1508 (3%) Strand=Plus/Plus Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962 |||||||| |||||||| || ||| || | | | || || |||| ||||| ||| Sbjct 1061557 TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGC 1061616 Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022 || |||||||| |||||||||| || || | ||| ||| || ||||| || || | | Sbjct 1061617 TCGAAGCACTCGTTGTTACCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAGG 1061676 Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC-CTTGAGGGCG-TCCCAGTCGT 114080 || || |||||||||| ||| | | ||| | | | || || ||| |||||||| Sbjct 1061677 AGCAGACTGTTACGGATACCGTGAGTCTTAA--CATCCTCTCGAAGGCTCTCCCAGTCCC 1061734 Query 114081 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCG 114140 | | | || | | |||||| || |||||||||||||| | ||||| || | Sbjct 1061735 AAAGGTCGGAAGGCTTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAG 1061794 Query 114141 ATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGA 114197 | |||| || || ||| || ||||| ||| ||||| | ||||| || || Sbjct 1061795 AACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAG---GCAGTGA 1061851 Query 114198 GGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAAT 114257 |||| ||||| || || |||||||| || | || | | | ||||| || | Sbjct 1061852 GGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCTGGAGACT 1061911 Query 114258 CAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 114316 | || | | || || | || || |||| || ||||| || ||||| || || || Sbjct 1061912 CGAAGGGCATGCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCAAGACCGATA 1061970 Query 114317 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 114376 || || || | ||| || || ||||| | ||| || || || |||||| Sbjct 1061971 GGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGCACAGGGTAGTGGTTGACATCGATG 1062030 Query 114377 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 114436 | | | || | || | ||||||| ||| | ||| ||||| | | ||||| | Sbjct 1062031 ATCTTGTTCAAGTTGCGGACAACAACCTGACTGACCTGATGCAGCTTCTTGAAATCATA- 1062089 Query 114437 CTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 114493 || || ||| |||| ||| | ||| ||||| | || || || || || ||| Sbjct 1062090 --GCAAGCCTCATCATAGTTGATGAAAGCAGGCAGGGCAAGGGAGGCAAGGTTGCAAACA 1062147 Query 114494 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 114553 | | |||||| || |||||| || || || || |||| ||| || || ||| Sbjct 1062148 GCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCTTCGGATG 1062207 Query 114554 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 114613 ||||| | |||||| || || ||| |||||| |||||||||||||||||| | || Sbjct 1062208 GTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCATGAAGGGG 1062267 Query 114614 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGT 114672 | || ||||| || |||| || ||| || || | ||| | | || | | || | | Sbjct 1062268 TTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATACCAAAGCTTCTGGGCCTTG----AT 1062323 Query 114673 GGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACC 114729 || ||| | | || ||| ||||||||| ||||||||| |||||||||||||| Sbjct 1062324 GGACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTCACC 1062383 Query 114730 CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTC 114789 | || | || || || || | ||||| | ||| | ||| | || || Sbjct 1062384 GTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTT 1062443 Query 114790 CTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCG 114849 |||||||||||||||||| ||||| ||||||||||| || ||| || || || ||| Sbjct 1062444 CTCAACACGCTTCATGAAAAGGTCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGGCGCG 1062503 Query 114850 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 114909 | || || | || || || || | || | || || | || ||| |||||||| Sbjct 1062504 GACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGCGTGCCA 1062563 Query 114910 CGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATA 114963 || || ||||| | || | | || | | || |||| |||| | || || Sbjct 1062564 AGGCTCAAGGTAGATAGCAAAAGCACC---AGGTCGCTTGTTACCACCCTGATCAACGTA 1062620 Query 114964 CCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 115023 | || ||| || || || || ||||| |||| | ||| | ||| || || || Sbjct 1062621 GCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGGATGTACCGTTGGT 1062680 Query 115024 CCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCAT----ACCAATACC 115077 || || || ||| | | |||| | || | | || |||| ||||||||| Sbjct 1062681 ACCAGCAATGTAGGAGCC--AGTGGCACGGA----TTCGGTGGGCATTGAGACCAATACC 1062734 Query 115078 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGA 115137 || ||| ||| || || || || | |||| | | ||||| ||||| || Sbjct 1062735 ACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGATACCGTCAATGCT 1062794 Query 115138 GTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 115197 ||| |||| | | | | |||||| || | || || || ||||||||||| Sbjct 1062795 GTCCTCCTTCATATCAACCAAGAAGCATGAAGAAAGCTGGGGTTGAGGGGTACCAGCGTT 1062854 Query 115198 GAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCC 115255 ||||||||| || | || ||| ||| | | |||| |||||| | ||| |||||| Sbjct 1062855 GAAGAGGGTGGGGGAAGCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCC 1062912 Query 115256 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 115315 ||||| ||| || || || ||||| || || || ||||| | ||||| || Sbjct 1062913 AAGACACGCTCAATATCATCGCCCCATATACCAATAGACACACGCATGATCATGTGCTGA 1062972 Query 115316 GGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGA 115375 || ||| | | | || || | | | ||||||| |||||| ||||||| Sbjct 1062973 GGACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTATGATCGCTCCAATGTCTTGAAG 1063032 Query 115376 CCAAAATA 115383 ||||| || Sbjct 1063033 CCAAAGTA 1063040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352980245640