Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq66 253 2e-62 >seq66 Length=1847925 Score = 253 bits (280), Expect = 2e-62 Identities = 1062/1664 (64%), Gaps = 28/1664 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || ||||| || |||||||||||||| || |||| | Sbjct 1063046 TACCAATACTTTGGCTTCAAGACATTGGAGCGATCATACCTCCTCAAGATTGACGGCAAG 1062987 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||| || || || || || | ||||| || | || || || ||| | || Sbjct 1062986 ATTGTCGAACGTCCTCAGCACATGATCATGCGTGTGTCTATTGGTATATGGGGCGATGAT 1062927 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| ||| | | | || |||| |||| | ||| || || Sbjct 1062926 ATTGAGCGTGTCTTGGAGACATACAACCTCATGTCCAGCAAGTTCTTCACCCATGCTTCC 1062867 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||||| |||||||| || ||||| || ||| | ||||| || ||| || | Sbjct 1062866 CCCACCCTCTTCAACGCTGGTACCCCTCAACCCCAGCTTTCTTCATGCTTCTTGGTTGAT 1062807 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||| ||| ||| || | || | ||||||| |||||| | || || Sbjct 1062806 ATGAAGGAGGACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCC 1062747 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || || || || || || ||| || |||| | ||||||| || |||||||| Sbjct 1062746 AAGATGGCTGGTGGTATTGGTCTCAATGCCCACCGAATCCGTGCCACTGGCTCCTACATT 1062687 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 |||||||| || || |||||||| | || |||||||| || |||||||||||| | Sbjct 1062686 GCTGGTACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACT 1062627 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| || ||||||||| | | | ||| |||| || |||| || ||| Sbjct 1062626 GCCCGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAG 1062567 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||||| || || | ||| | || || |||||||||||||| || || | Sbjct 1062566 CCTTGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAG 1062507 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | ||| | ||||| ||| || |||||| | || |||||||| ||||| || || Sbjct 1062506 GTCCGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTT 1062447 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GT 94376 ||||| ||| | |||| || | || ||||| || || || || || ||||| | Sbjct 1062446 GAGAAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGC 1062387 Query 94377 T--TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | ||| | | ||||| | | | || | ||||| | | || |||| | Sbjct 1062386 TACGGTGAAGAG---TTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTCGC 1062330 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| || | || |||||| ||| || ||| | || | ||| ||||| || Sbjct 1062329 AAGTCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGA 1062270 Query 94495 ACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | |||||| |||| ||| |||| ||||||| || ||||||| Sbjct 1062269 AACCCCTTCATGCTTTACAAGGATGCCTGT-AACCGCAAGAGCAACCAGAAGAACCTCGG 1062211 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||| ||||| ||||||||||| ||||| ||||||| | | || || ||| | Sbjct 1062210 CACCATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGT 1062151 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673 ||||| || ||||| | |||| | |||| | ||||| | | || Sbjct 1062150 CGCTGTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCAT---------CAACTATGA 1062100 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTGAAC 94731 | |||| | ||| | || |||| | | | | ||| || ||| ||| Sbjct 1062099 TGAGGCTTGCTATGATTTCAAGAAGCT--GCATCAGGTCAGTCAGGTTGTTGTCCGCAAC 1062042 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 |||||| | | ||||| ||| |||||| || | ||||| ||| ||| || Sbjct 1062041 TTGAACAAGATCATCGATGTCAACCACTACCCTGTGCAAGAGGCTCGCAACAGCAACATG 1061982 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 || || || ||||| | || || |||||| | || || || | | |||| Sbjct 1061981 CGTCACCGACCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCTTGCTCTGCGC 1061922 Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911 |||||| ||| ||| || || | | || | | || || || | ||| || Sbjct 1061921 ATGCCCTTCGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTAC 1061862 Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971 ||| ||| | | ||||| || ||||||| ||| | || || || | Sbjct 1061861 CACGCTGCCCTCACTGCCTCCGTGCAGTTGGCCA---AGGAGGAGGGTCCCTACTCTACC 1061805 Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031 ||| || || ||| |||| || | ||||||||| | ||| || ||||| Sbjct 1061804 TTCAAGGGTTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCT 1061745 Query 95032 TCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 || | || | |||||||| ||| || || | ||||||| | |||||| | || Sbjct 1061744 TCCGACCTTTGGGACTGGGAGAGC-CTTCGAGAGGATGTTAAGACTCACGGTATCCGTAA 1061686 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | ||||| | ||||| ||||| || ||| || ||||||| || || |||||||| Sbjct 1061685 CAGTCTGCTCCTTGCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGTAACAACGA 1061626 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| || | |||||||||| | ||| | | || || || || || || |||| Sbjct 1061625 GTGCTTCGAGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCA 1061566 Query 95211 CGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| | || | || | || || | |||| ||||| ||| Sbjct 1061565 GGTTGTCAACCCCTGGTTGCTCAAGGATCTTGTCGAC-ATGGGCTTGTGGTCTGATGCCA 1061507 Query 95270 TCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGG 95329 | ||||||| | | || ||||| || | ||||||||||| | || || | | Sbjct 1061506 TGAAGAACCGTATTATTTCCGATAACGGTTCTATTCAGAACATCCCCAACATCCCTGCCG 1061447 Query 95330 ACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || ||||||| || |||||||| || |||||||| | |||||| Sbjct 1061446 ACGTCAAGGCTCTTTACAAGACTGTTTGGGAGATTTCTCAGCGC 1061403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722686724680