Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq19 158 2e-33 seq66 100 5e-16 >seq19 Length=533231 Score = 158 bits (174), Expect = 2e-33 Identities = 365/544 (67%), Gaps = 17/544 (3%) Strand=Plus/Minus Query 159628 CTTCTTGTATT--GCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATT 159685 ||||| ||| | ||||||| ||||||||| |||||||||||||| | | ||| || Sbjct 112672 CTTCTGGTAGTCAGCGACACG--CTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATG 112615 Query 159686 GATTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCC 159745 |||||||| |||| ||||| | | | || |||| |||||||| | Sbjct 112614 TTCTCCATGAAGTCGAAGGGGTTTGTGGCCTTGTAAACCTTCTCGTTGCCGAGAGCGACG 112555 Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAG 159804 || | | ||| || ||||| || ||||| || | |||| | | | || || || || Sbjct 112554 AGTAGACGGTCAGCGACAAACTCAATGTA-CTGCTTCATCAGGTTGGAATTCATGCCAAG 112496 Query 159805 CAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCAC 159864 ||| | |||||| || || | || ||||||| |||||| ||| || || | Sbjct 112495 CAGGGCACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCACAAAT 112436 Query 159865 AATCTGCGAGA----CACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGA 159920 || | | || | || || | |||| || | ||| | || | | Sbjct 112435 GATGTCCTGGATCATCTGCTTGCTAGCACGGC----CCTTGAGATGGGAGTGAA---GAA 112383 Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980 |||| ||||||||| ||| || ||||| || |||||||||| ||||||||| | | | | Sbjct 112382 GGCAGGCAAAGTCGGTGTGAAGGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCA 112323 Query 159981 GGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040 || ||||||| |||||| |||||||| || |||| ||||| |||||||| || | Sbjct 112322 AACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGA 112263 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCAT 160100 |||| ||||| ||||| || || || || || | | |||| | | || |||| | Sbjct 112262 AGATACCCTCGACGGCAGCGAAGGCAACCAGACGTTGGGCAAAGGTAGAGTCCTTGTCCT 112203 Query 160101 GGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 || |||| | ||||||| |||||||||||| |||||| || ||| || || |||| Sbjct 112202 GGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGT 112143 Query 160161 TAAA 160164 | || Sbjct 112142 TGAA 112139 >seq66 Length=1847925 Score = 100 bits (110), Expect = 5e-16 Identities = 442/684 (65%), Gaps = 18/684 (3%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || |||||||| || | | |||||| |||| | | || |||||||||| Sbjct 1061208 CTGGTCGACAGTGAACTGGATAGGGGCGGCGGCAG-CCTGTGTGCGAAGGTAGTACATGC 1061266 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || || || ||| ||| | ||||||| | | |||| || ||| Sbjct 1061267 CAGTCTTGAGACCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATCGTGG 1061326 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 | || |||||||||||| || |||||| || |||||||||| | || || || | Sbjct 1061327 GATCCTTCATGTGAATGTTGAGGGACTGGGACTGATCGATGAAAGCACCTCGGTCGGCAG 1061386 Query 204018 CCATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075 |||| | || || ||| ||| ||||||||||| || |||||| | | | || Sbjct 1061387 CCATCTGGACAACCTGG--CGCTGAGAAATCTCCCAAACAGTCTTGTAAAGAGCCTTGAC 1061444 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || ||| | | | | || ||| || || ||||| |||| || | | || Sbjct 1061445 GTCGGCAGGGATGT-TGGGGATGTTCTGAATAGAACCGTTATCGGAAATAATACGGTTCT 1061503 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194 || | | || ||||| ||||| || || ||| | || |||||||| | Sbjct 1061504 TCATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTGACAA 1061563 Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254 ||| || || || | || || | || | | | |||| |||| | || ||||| Sbjct 1061564 CCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGCTCGAAGC 1061623 Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314 ||||||||| || | |||||| | ||| ||||| || ||||| || || |||||||| Sbjct 1061624 ACTCGTTGTTACCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAGGAGCAGAC 1061683 Query 204315 AGTTGCGCACACCGT-ATTTTTGGACCCTGCGCTTCAGAGAGGT-CCAGTCGTGCA--TC 204370 ||| || | ||||| | | || | | | | || | | | |||||| | || Sbjct 1061684 TGTTACGGATACCGTGAGTCTT--AACATCCTCTCGAAGGCTCTCCCAGTCCCAAAGGTC 1061741 Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430 | | || || ||| ||||||||||||||| | ||| || | | | | || ||| Sbjct 1061742 GGA--AGGCTTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAACCC 1061799 Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC-GAGGCGGCCATGGCGTG 204489 ||| | || | || || ||||| | |||| | ||||| ||||| | | ||| Sbjct 1061800 TTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAAC-TGCACGGAGGCAGTGAGGGCAGC 1061858 Query 204490 ATAGTACATGGTCTCAAAGATCTG 204513 | ||| ||||||||||||||||| Sbjct 1061859 GTGGTAGATGGTCTCAAAGATCTG 1061882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154375026480