Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq66 215 6e-51 seq19 107 2e-18 seq15 104 3e-17 >seq66 Length=1847925 Score = 215 bits (238), Expect = 6e-51 Identities = 520/774 (67%), Gaps = 35/774 (5%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGG--AAGATATTGATTCTG 111669 || ||| ||||| ||||||| || | || ||||| |||||| | |||||||| || Sbjct 1062974 CCTCAGCACATGATCATGCGTGTGTCTATTGGTAT--ATGGGGCGATGATATTGAGCGTG 1062917 Query 111670 TTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | |||||||||||| || |||||| | | |||| ||| || | || ||||||| Sbjct 1062916 TCTTGGAGACATACAACCTCATGTCCAGCAAGTTCTTCACCCATGCTTCCCCCACCCTCT 1062857 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||||||||| || |||||| | || || ||| | ||| | ||||||| Sbjct 1062856 TCAACGCTGGTACCCCTCAACCCCAGCTTTCTTCATGCTTCTTGGTTGATATGAAGGAGG 1062797 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || | || || || | || |||| |||||| || || ||| ||||| Sbjct 1062796 ACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTG 1062737 Query 111850 GTGGTATCGGG----ATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAG 111903 ||||||| || |||| || | | || | |||| | ||| || || | Sbjct 1062736 GTGGTATTGGTCTCAATGCCCACCGAA----TCCGTGCCACT--GGCTCCTACATTGCTG 1062683 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 |||| || ||| ||| | ||| || |||| ||||| || || || ||| ||| || | Sbjct 1062682 GTACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCC 1062623 Query 111964 GCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGC 112017 |||| || | || | ||| | |||| || || | || |||| ||||||| Sbjct 1062622 GCTACGTTGATCAGGGTGG---TAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGC 1062566 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 | |||||||| ||| || | ||||||||||| | || ||||| ||| | ||||||| Sbjct 1062565 CTTGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGG 1062506 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 || |||||| || ||| || |||||||| || || || ||||||||| | |||| Sbjct 1062505 TCCGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTG 1062446 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || ||| || | ||| | ||| | || || || || || ||||| |||| | Sbjct 1062445 AGAAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCT 1062386 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGA 112257 ||||| |||||||| ||||||||| ||||||||| ||| || || | | || | Sbjct 1062385 ACGGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGG-GTC-GCAA 1062328 Query 112258 CGGTGCCAGC--TGCC--GATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312 || ||| | ||| || | | ||| | || || ||| || | || |||||||| || Sbjct 1062327 --GT-CCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGG 1062271 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 112366 | || | ||||||||||| || |||||||||| ||||| || || ||||| Sbjct 1062270 AAACCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAA 1062217 >seq19 Length=533231 Score = 107 bits (118), Expect = 2e-18 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 102112 TTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGT 102170 |||| || || | |||||| || || ||||| || ||| | | |||| | | | | Sbjct 112158 TTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTC-T 112216 Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||||| | || || | || || || || ||||||||||||||| ||| || Sbjct 112217 ACCTTTGCCCAACGTCTGGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCC 112276 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || | | || | |||||||||||||| || |||||||| ||| | |||||||||| Sbjct 112277 TTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTTTGACCTTCTCCAAC 112336 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||||||||| ||||| || ||| || ||||| Sbjct 112337 GAGCTCATCTCTCGTGATGAGGGCCTTCACACCGACTTTGC 112377 >seq15 Length=801649 Score = 104 bits (114), Expect = 3e-17 Identities = 165/230 (72%), Gaps = 10/230 (4%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGCGAGCGACTTCAA 16119 |||||||| || ||||||||||| || | || ||| | || ||| || | | || Sbjct 331050 GGCATCAAGTTCGTCAATGAAGACAATAGAGGGAGACTTGTTCTTGGCG-GC-AGT--AA 331105 Query 16120 AGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 16179 |||| || || || |||||||| || |||||||| || ||||| |||| || | || | Sbjct 331106 AGAGTTCACGGACTCGCTTGGCTCCAACACCAACGAAGATCTCGTCAAA-TTCACTGCCG 331164 Query 16180 AACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 16238 |||| | || ||| || ||| || |||||| |||| ||||| ||||| || |||||| Sbjct 331165 GACATGTAGAAGAACGGAACACCAGCTTCACCAGCAACAGCTCGAGCGAGGAGCGTCTTA 331224 Query 16239 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 || ||||| || ||| | |||||| |||| |||| ||||| || Sbjct 331225 CCGGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGAAGTTTGGCACC 331274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741755979760