Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq66 224 1e-53 seq15 109 6e-19 >seq66 Length=1847925 Score = 224 bits (248), Expect = 1e-53 Identities = 570/860 (66%), Gaps = 23/860 (3%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||| | || || | ||||||||||| |||||| | |||||| | Sbjct 1062118 GGCAGGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATG 1062177 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| || || || || || || | ||||| ||||| ||||| | Sbjct 1062178 ATCTCAGTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 1062237 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 || || ||||||||||| |||||| |||| | || ||||| ||||| | || ||| || Sbjct 1062238 TTACAGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATG 1062297 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGTCCCTCCGC-CTCGTA 106692 || | ||| | | || | | || | |||| ||| ||| | ||| | | |||||| Sbjct 1062298 GCATACCAAAGCTTCTGGGCCTTG----ATGGACTTGCGACCCTTACCTTCCCTCTCGTA 1062353 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 ||| ||||||||| |||||||| ||||| ||||| ||||| || || || Sbjct 1062354 CTTCTCGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTT 1062413 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || || | || | ||| | || || |||||| ||||||||||||||||| || || Sbjct 1062414 GGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGGAT 1062473 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 ||| |||| || || || | || |||| || | ||| ||||| ||| | Sbjct 1062474 CCAGAGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAG 1062533 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTT 106932 ||||||||||| | || ||| |||||||| |||||||| |||| || | || || Sbjct 1062534 ATCAAGGAACTCGAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGG 1062593 Query 106933 TCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 106989 ||| ||| | |||| || ||||| || ||| ||| || || || ||||| || Sbjct 1062594 TCGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGG 1062653 Query 106990 AATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 107049 || || ||| | ||| ||| || || || ||| || | ||| ||| Sbjct 1062654 AACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGG----CACGGA 1062709 Query 107050 ATGGATGTGCAT----CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 | | || |||| |||||||| |||||| ||| || || ||||| | | | Sbjct 1062710 TTCGGTGGGCATTGAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGA 1062769 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 | || |||||||||||| || ||||||||| | | | | |||||| || | Sbjct 1062770 GGGTATCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAAGAAA 1062829 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 107225 ||| ||| || |||||||| ||||||||||| || | || || ||| | | ||| Sbjct 1062830 GCTGGGGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGA--AGAACTT 1062887 Query 107226 G--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283 | |||||| || |||||||||||||||| ||||| || || || || || || Sbjct 1062888 GCTGGACATGAGGTTGTATGTCTCCAAGACACGCTCAATATCATCGCCCCATATACCAAT 1062947 Query 107284 GGCCACACGCATAAACATGT 107303 | ||||||||| | ||||| Sbjct 1062948 AGACACACGCATGATCATGT 1062967 >seq15 Length=801649 Score = 109 bits (120), Expect = 6e-19 Identities = 164/230 (71%), Gaps = 10/230 (4%) Strand=Plus/Plus Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTCAA 9426 |||||||| || ||||||||||||||| | || ||| | || |||| | || Sbjct 331050 GGCATCAAGTTCGTCAATGAAGACAATAGAGGGAGACTTGTTCTTGGCGGCAG----TAA 331105 Query 9427 AGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9486 |||| || || || | ||||| || |||||||| || ||||| |||| || | || | Sbjct 331106 AGAGTTCACGGACTCGCTTGGCTCCAACACCAACGAAGATCTCGTCAAA-TTCACTGCCG 331164 Query 9487 AACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9545 |||| | || ||| || ||| || |||||| |||| ||||| ||||| || |||||| Sbjct 331165 GACATGTAGAAGAACGGAACACCAGCTTCACCAGCAACAGCTCGAGCGAGGAGCGTCTTA 331224 Query 9546 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 || ||||| || ||| | |||||| ||||| |||| ||||| || Sbjct 331225 CCGGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGAAGTTTGGCACC 331274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980187894920