Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq55 93.3 5e-14 >seq55 Length=1899268 Score = 93.3 bits (102), Expect = 5e-14 Identities = 259/397 (65%), Gaps = 3/397 (1%) Strand=Plus/Plus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| || || |||| || | || || || || || || ||||| |||| ||||| Sbjct 818501 GAAAGGTTTGCCTGATCCCTGTTTCTGCTCACGGCACCAACCCTGCCTCCGCTGCCATGG 818560 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA---TGGTAACATAGACATCAAAG 154827 | || ||||| || || |||||||||||| | | | ||||||| | ||| || | | Sbjct 818561 CCGGTATGAAGGTCGTCACTGTCAAGTGTGACGCTAAGACTGGTAACCTGGACGTCGAGG 818620 Query 154828 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887 |||| || || ||| | | | |||||| | | || ||| ||||||||| Sbjct 818621 ATCTCAAGGCCAAGTGCGTCAAGCACGCGGATGAACTTGCTGGCATCATGGTTACATACC 818680 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947 | || || |||||| || || | | || | ||| | || | | || || || Sbjct 818681 CTTCCACCTTTGGTGTCTTCGAGCCCGAGATCAAGCAGGTCTGCGACCTTGTCCACGAGC 818740 Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||| |||| || || | || || || || | || || ||| | || || | | Sbjct 818741 ATGGCGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTCTGCAGCC 818800 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 | |||| || || ||||| || ||||| ||| | || || || ||||||||||| | Sbjct 818801 CCGGTGACATCGGCGCTGATGTCTGCCATCTCAACCTCCACAAGACCTTCTGTATTCCCC 818860 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | || ||||| || || || || || ||||| | ||| Sbjct 818861 ACGGTGGTGGTGGCCCCGGTGTTGGCCCTATCGCTGT 818897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212199066720