Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq66 217 3e-51 seq19 185 2e-41 >seq66 Length=1847925 Score = 217 bits (240), Expect = 3e-51 Identities = 721/1104 (65%), Gaps = 53/1104 (5%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGG 221475 || |||||||||||||||||||||||||||||| ||||||||| |||| | ||||| || Sbjct 1061848 GTGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAG-CTCTCTAGCCTCTGG 1061906 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 ||| ||||||||| ||||| | | ||||| | || || || |||||||| || | | Sbjct 1061907 AGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCAGCAAGACCCTGTACACCAAGA 1061964 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 ||||| || | ||| | | ||||| | ||| || ||| |||| || || ||||| Sbjct 1061965 CCGATAGGTCGGTGACGCATGTTGCTGTTGCGA--GCCTCTTGCACAGGGTAGTGGTTGA 1062022 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||| | ||| | | || | | |||| |||||||| | Sbjct 1062023 CATCGATGATCTTGTTCAAGTTGCGGACAACAACCTGACTGACCTGATGCAGCTTCTTGA 1062082 Query 221652 GATTGAACACCAACTCGCCGC--CGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709 || | | ||| ||| | | | || || | ||||| ||||||| Sbjct 1062083 AATC--ATAGCAA---GCCTCATCATAGTTGATG---------AAAGCAGGCAGGGCAAG 1062128 Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769 | ||| ||||| || || || ||||| || | |||| |||||||| || || Sbjct 1062129 GGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCA 1062188 Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 || || || |||||| || |||| || || || |||||| || || || Sbjct 1062189 CAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATC 1062248 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||| ||||| ||||| || ||||| ||| ||| | || || | ||| || Sbjct 1062249 CTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATACCAAAG 1062308 Query 221890 TTCTCTGGCGCTC-----AC---CGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCG 221941 | ||||| || || || || ||| || | | |||| ||| || Sbjct 1062309 CT-TCTGGGCCTTGATGGACTTGCGACC-CTTACCTTCCCTCTCGTACTTCTC------- 1062359 Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 ||| || || | |||||| ||||||||| ||| | || || || ||| | ||| Sbjct 1062360 GTAGAGGGCCT--CAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 1062417 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 ||||| || |||| | ||| | | || | || |||||| ||||| |||||||| Sbjct 1062418 CACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAG 1062477 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 || ||| | || || || | || || ||||||| |||| ||| || | ||||| Sbjct 1062478 AGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCA 1062537 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 | ||||| || | ||||||||||| ||||| || |||| || | ||| || |||||| Sbjct 1062538 AGGAACTCGAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGGTCGC 1062597 Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTAC 222240 ||||| |||||||||| || | | ||| | |||||||| || || | || || Sbjct 1062598 TTGTTACCACCCTGAT-CAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAAC 1062656 Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTT 222297 | ||||||||| ||||||||| || |||||| | || ||| | | ||| Sbjct 1062657 AACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGT- 1062715 Query 222298 ACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGT 222357 |||| | || |||||||| || || || |||||||| ||| ||||||| || Sbjct 1062716 --GGGCATTGAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGT 1062773 Query 222358 GTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG 222417 || ||| || || || ||||||||| | | | || || || || || | ||| Sbjct 1062774 ATCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAAGAAAGCTG 1062833 Query 222418 AGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGA 222477 | || | || || ||||| || || ||||| || || || ||| | || || Sbjct 1062834 GGGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGA 1062893 Query 222478 CATCAGATCGTACGTCTCTACGAC 222501 ||| || | ||| ||||| | ||| Sbjct 1062894 CATGAGGTTGTATGTCTCCAAGAC 1062917 >seq19 Length=533231 Score = 185 bits (204), Expect = 2e-41 Identities = 379/563 (67%), Gaps = 3/563 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| ||||| ||||||||||| Sbjct 111824 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGATCTC 111883 Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| ||| || ||| ||| ||||||||| || || Sbjct 111884 TCCAAGGATCTCCACGATTGGAACAACCGTCTGACCACTGACGAGCAGTTCTTCATCTCT 111943 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || || |||||||| || || |||||||| || ||| || Sbjct 111944 CACATCCTTGCCTTCTTCGCTGCTTCTGATGGCATTGTCAACGAGAACCTAGTTGAGCGA 112003 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || |||||||| ||||| || || Sbjct 112004 TTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTACGGATTCCAAATCATGATG 112063 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || ||| | ||||| ||| ||| || ||| | || ||||| | || ||| Sbjct 112064 GAGAATATTCACTCCGAGACCTATTCCCTGCTCATTGACACCTACATCAAGGAGCCTGCC 112123 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 || || || || || | || ||| ||| ||||| | |||||| Sbjct 112124 CAGCGAACCTACCTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAAGGCTGAC 112183 Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 |||||||| |||||| | | || | |||| |||| | | || ||||| ||||| Sbjct 112184 TGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAACGTCTGGTTGCCTTC 112243 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 ||||| || ||||| ||||| ||||||||| | ||||| ||||||||||||||||| || Sbjct 112244 GCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAG 112303 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||||||| || ||| ||||||||||||||| | || ||||| || Sbjct 112304 CGTGGCCTCATGCCCGGTTTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGCCTT 112363 Query 26014 CACAGAGATTTTGCCTGCCTGCT 26036 |||| || ||||||||||| || Sbjct 112364 CACACCGACTTTGCCTGCCTTCT 112386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843836323520