Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq55 104 3e-17 >seq55 Length=1899268 Score = 104 bits (114), Expect = 3e-17 Identities = 171/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||| || || | || ||||| | ||||| || || || || || || || |||||||| Sbjct 817746 ACCGTGGTAGACCGCGTAGAAGGCGGACATGTTGGCAAGAAGAGCCTGGGCCGTGCAGAT 817687 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 ||| ||||| || || || | || ||| |||||||| | ||| || || || | | ||| Sbjct 817686 GTTGCTGGTGGCCTTCTCACGTCGAATGTGCTGCTCACGAGTCTGGAGAGCGAGAC-GTA 817628 Query 139391 -TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCT 139449 ||||| ||||| | ||| || ||| |||| | ||| || ||||| | || Sbjct 817627 GAGCAGGCTTGCCGAGACGATCCTTAGAAACACCGACAAGACGGCCGGGGATCTTGCGCT 817568 Query 139450 TATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATAC 139509 | ||||| || | || || ||||| ||||| |||||||| ||||| |||| || | || Sbjct 817567 TGTACTTCTCAGAGGTAGCGAAGAAAGCAGCGTGAGGACCACCGTAGCCCAGGGGGACAC 817508 Query 139510 CAAA 139513 | || Sbjct 817507 CGAA 817504 Score = 102 bits (112), Expect = 9e-17 Identities = 261/397 (66%), Gaps = 3/397 (1%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || || || || ||||| || || ||||||||||| ||||| || Sbjct 818897 ACAGCGATAGGGCCAACACCGGGGCCACCACCACCGTGGGGAATACAGAAGGTCTTGTGG 818838 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| || || ||||| || | ||||| | ||| || Sbjct 818837 AGGTTGAGATGGCAGACATCAGCGCCGATGTCACCGGGGCTGCAGAGACCAATCTGGGCG 818778 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | || | | Sbjct 818777 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACAAGGTCGCAGACC 818718 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || |||||| || || || ||||||| ||| || | | Sbjct 818717 TGCTTGATCTCGGGCTCGAAGACACCAAAGGTGGAAGGGTATGTAACCATGATGCCAGCA 818658 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479 |||||| | | | ||| || || ||||| | || ||| | ||| ||| Sbjct 818657 AGTTCATCCGCGTGCTTGACGCACTTGGCCTTGAGATCCTCGACGTCCAGGTTACCAGTC 818598 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | | |||||||||||| || || ||||| || |||||| | || ||||| || Sbjct 818597 TTAGCGTCACACTTGACAGTGACGACCTTCATACCGGCCATGGCAGCGGAGGCAGGGTTG 818538 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTC 138576 || || || || || | || ||||| || || |||| Sbjct 818537 GTGCCGTGAGCAGAAACAGGGATCAGGCAAACCTTTC 818501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997799289160