Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq66 219 5e-52 seq15 84.2 3e-11 >seq66 Length=1847925 Score = 219 bits (242), Expect = 5e-52 Identities = 929/1442 (64%), Gaps = 49/1442 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || | || || || || || || ||||| |||| Sbjct 1062974 CCTCAGCACATGATCATGCGTGTGTCTATTGGTATATGGGGCGATGATATTGAGCGTGTC 1062915 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 |||||||||||| || |||||| |||| | | ||| || || | || ||||||| Sbjct 1062914 TTGGAGACATACAACCTCATGTCCAGCAAGTTCT--TCACCCATGCTTCCCCCACCCTCT 1062857 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| |||||||| || ||| ||| | || |||||| | | | | ||||||| Sbjct 1062856 TCAACGCTGGTACCCCTCAACCCCAGCTTTCTTCATGCTTCTTGGTTGATATGAAGGAGG 1062797 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || |||||||||||| || || | | ||||| || || ||| ||||| Sbjct 1062796 ACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTG 1062737 Query 75450 GGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 | |||||||| |||| || | | ||| ||| | || ||| || Sbjct 1062736 GTGGTATTGGTCTCAATGCCCACCGAATCCGTG----CCACTGGCTCCTACATTGCTGGT 1062681 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| ||| | ||| || |||| ||||| || || || ||| ||| || ||| Sbjct 1062680 ACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCCGC 1062621 Query 75566 TATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCA 75619 || || |||| ||| || |||| | || | | || ||||| | || || Sbjct 1062620 TACGTTGATCA---GGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCT 1062564 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| || ||| || | ||||||||||| | ||| ||||| ||| | || |||| Sbjct 1062563 TGGCACGCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 1062504 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || || || |||| ||||| || ||||||||||||||||| |||||| Sbjct 1062503 CGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAG 1062444 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || || | ||| | || | || || || || || ||||| ||||| Sbjct 1062443 AAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTAC 1062384 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA-GAGCCAATGCGAC 75858 ||||| |||||||| ||||||||| ||||| || ||| |||| | | | || | Sbjct 1062383 GGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTC---GCAAG 1062327 Query 75859 TGTACCA-GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | || | | | || | ||||| | || || ||| | | ||||| ||||| |||| Sbjct 1062326 TCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGAAAC 1062267 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||||||||||||||| |||||| ||||| ||||| ||||| | || || Sbjct 1062266 CCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGCACC 1062207 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| ||||| ||||| || || | |||||| | |||||| ||| Sbjct 1062206 ATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCT 1062147 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACT 76093 |||||||| | || || | ||||| || | ||| |||| ||| || || Sbjct 1062146 GTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTATGATGAGGCTTGC--- 1062090 Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | ||||| | || || ||| | ||| || ||||| | || | ||| || Sbjct 1062089 TATGATTTCAAGAAGCTGCATCAGGTCAGTCAGGTTGTTGTCCGCAACTTGAACAAGATC 1062030 Query 76154 ATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210 || || || || || || ||| || ||| | || || ||||| ||| || Sbjct 1062029 ATCGATGTCAACCACTACCCTGTGCAAGAGGCT-CGCAACAG--CAACATGCGTCACCGA 1061973 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATT 76269 ||||| ||| | ||||| || ||||| || |||| || || | || ||| | || Sbjct 1061972 CCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTT 1061914 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 || || || || | ||| | || | |||||||| ||||| || ||||| | Sbjct 1061913 CGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCTGC 1061854 Query 76330 CCTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 ||| || ||| | ||||| | | | ||| |||| || || |||||| Sbjct 1061853 CCTCACTGC-CTCCGTGCAGTTGGCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGTT 1061795 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAAC 76447 ||||||| || | || | || ||||| || |||| |||| || || || | | Sbjct 1061794 CTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGT-GGAACGTCAAGCCTTCCGACCTT 1061736 Query 76448 TACGACTGGGA-TGTTCTCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | |||||||| | || || | | | | ||| | ||| | ||||||||||| Sbjct 1061735 TGGGACTGGGAGAGCCTTCGAGAGGATG--TTAAGACTCACGGTATCCGTAACAGTCTGC 1061678 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | | || || ||||| || ||| ||| | || || ||||||| || || ||||| | Sbjct 1061677 TCCTTGCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGTAACAACGAGTGCTTCG 1061618 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | || ||||| | ||||| |||| | | || ||| || |||||||| |||||| Sbjct 1061617 AGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCAGGTTGTCA 1061558 Query 76626 AC 76627 || Sbjct 1061557 AC 1061556 >seq15 Length=801649 Score = 84.2 bits (92), Expect = 3e-11 Identities = 200/294 (68%), Gaps = 14/294 (5%) Strand=Plus/Minus Query 175213 GCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTG-G 175271 ||||| || ||||| | || | || || ||||| ||| ||||| || | ||| | | Sbjct 331337 GCCAAGGAGGAACTCCAGGAAGTCGTCGAGTTTCTGAAG-AACCCT-GAAAAGTTTAGCG 331280 Query 175272 AAGT-GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGA 175330 | | |||||||| | ||| || | ||| || | ||| || ||||| || |||| Sbjct 331279 ACCTCGGTGCCAAACTTCCCAAGGGTGTCCTCCTGGTCGGTCCTCCTGGTACCGGTAAGA 331220 Query 175331 CCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAG-TGCTCTGCC 175389 | |||||||| ||||| | || |||||| | ||| || ||| || | || | || Sbjct 331219 CGCTCCTCGCTCGAGCTGTTGCTGGTGAAGCTGGTGTTCCGTTCTTCTACATGTCCGGCA 331160 Query 175390 GCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAA 175449 | || |||| ||||| || |||||||| || ||||| | || || || |||||| Sbjct 331159 GTGAA-TTTGACGAGATCTTCGTTGGTGTTGGAGCCAAGCGAGTCCGTGAACTCTTTA-- 331103 Query 175450 ATCGCCCGCGAAAATCAA----CCATGTATTGTCTTCATTGATGAGATTGATGC 175499 | |||| || | ||| || | ||||||||||||||| || ||||||| Sbjct 331102 --CTGCCGCCAAGAACAAGTCTCCCTCTATTGTCTTCATTGACGAACTTGATGC 331051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568981059040