Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq11 120 4e-21 seq77 118 1e-20 seq19 113 6e-19 seq66 109 7e-18 seq4 105 8e-17 >seq11 Length=873904 Score = 120 bits (132), Expect = 4e-21 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||| |||||| || || || || || || || ||||| | |||||||| ||| Sbjct 743300 GACAGCACCGGCGGAACCGTCACCTGTGTCATCCGTAATGTGCCCTCTGGCCTCGGTGAG 743241 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | ||||| | ||||||||||||||| |||| ||||| |||||| Sbjct 743240 CCCTGCTTCGACAAGCTGCAGGCCACCCTCGCCCACGCCATGATGTCCATCCCCGCCACC 743181 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| |||||| | ||| ||| || Sbjct 743180 AAGGGTTTCGAGCTAGGCTCCGGCTT 743155 Score = 116 bits (128), Expect = 5e-20 Identities = 226/333 (68%), Gaps = 12/333 (4%) Strand=Plus/Minus Query 18166 GAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACG 18225 ||||| || |||||||| || | | || || ||||| |||||| || | |||| Sbjct 743849 GAGGCTGATATCCAGCCCCAACTCAACCGCCGTCGACCAGGCCAGTCGGCCATCACCACA 743790 Query 18226 CCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTC 18285 || || ||||| || ||||||| ||||| || ||||| || | ||| |||| ||| Sbjct 743789 CCCCGTAACGAAAAGGACCGCGTCACTATCCACTCCGGCACTGAAGATGGCGTCACTCTC 743730 Query 18286 GGCTCGCCCGTCGGCCTCTT---TGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCC 18342 ||| |||| || ||||| ||| | ||| || ||||| || ||||| | Sbjct 743729 GGCACGCCGATC---CTCTTGACTGTTCCTAACGAGGATCAGCGACCAAAGGACTACGGC 743673 Query 18343 GACATGTGCAAGGTGC------CGCGGCCCTCACACGCCGACTACACCTACATGGCCAAG 18396 ||| | || | | | || ||| || ||||||| || ||| | | ||| Sbjct 743672 AACAAGACCATCGACCTCTACCCCCGTCCCAGTCATGCCGACTGGACTTACCTCGAGAAG 743613 Query 18397 TACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGC 18456 |||||| ||||||| || || ||||| ||||| ||||| ||||||||| | ||| Sbjct 743612 TACGGCGTCAAGGCCTCATCTGGCGGTGGCCGCAGCTCTGCTCGCGAGACCATTGCTCGC 743553 Query 18457 GTCGCCGCCGGCGCGGTCGCCGAGAAATGGCTC 18489 || ||||| || || ||||||||||| |||||| Sbjct 743552 GTGGCCGCTGGTGCTGTCGCCGAGAAGTGGCTC 743520 >seq77 Length=1722064 Score = 118 bits (130), Expect = 1e-20 Identities = 92/110 (84%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 ||||||||| ||||||||||| || || ||| |||| ||||| | || ||||||||||| Sbjct 511762 CAACTACCTTGACATCAAGCCCCTCCTTGATGTTGGCTGCAAAACCGTTGCCAACATGAT 511821 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||| || ||||| || |||||||| || ||||||| | ||| Sbjct 511822 CAAGGGCAAGTCTCCTGAGGAAATTCGCAAGACGTTCAACATCACGAACG 511871 >seq19 Length=533231 Score = 113 bits (124), Expect = 6e-19 Identities = 204/290 (70%), Gaps = 15/290 (5%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || || || ||| ||| | |||||| |||| | |||||||||||||| |||||| Sbjct 112359 CCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAAACCGGGCATGAGGCCACGCTTC 112300 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGC-CCG-AGAAAAAGATGCCCTCGACGGCGGCAA 869297 |||||||| ||||||| | | || || ||| ||| ||||| ||||||||||| || | Sbjct 112299 TTGAGCCAGAAGATGGAG--GCAAAGGCACCGCTGAAGAAGATACCCTCGACGGCAGCGA 112242 Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATCG 869354 || | | || || | ||||||| || ||| |||||| | |||||| || | Sbjct 112241 AGGCAACCAGACGTTGGGCAAAG--GTAGAG----TCCTTGTCCTGGATCCATCGAATGG 112188 Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCC 869413 ||||||| ||||| || | | | || | || || | ||| ||||||| ||| | Sbjct 112187 CCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGTTGAAGAGGTAGGTTC 112128 Query 869414 TTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| || ||||||| |||||||| || || || ||||||||||| Sbjct 112127 -GCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAATAGGTCTC 112079 Score = 87.8 bits (96), Expect = 2e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || | || ||| |||||| |||||||||||||| | || ||||| Sbjct 112674 GCCTTCTGGTAGTCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATG 112615 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||| | | |||||| ||| ||| ||||| | || Sbjct 112614 TTCTCCATGAAGTCGAAGGGGTTTGTGGCCTTGTAAACCTTCTCGTTGCCGAGAGCGACG 112555 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 || || ||||| ||||||||||| |||||||| ||| ||| || |||||||| Sbjct 112554 AGTAGACGGTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGAATTCATGCC 112499 >seq66 Length=1847925 Score = 109 bits (120), Expect = 7e-18 Identities = 319/491 (65%), Gaps = 19/491 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| || |||||||| || |||| ||| ||||| || ||||| || || | |||||||| Sbjct 1062609 CTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGGA 1062668 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || || | ||||| ||| | ||| || | ||| || | || Sbjct 1062669 TGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGGGCATTGAGACC 1062728 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || || ||| |||||| || | || || ||||| || || ||||| || || Sbjct 1062729 AATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGATACCGTC 1062788 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| ||||||| || || | ||||| || || || || || | || || Sbjct 1062789 AATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAAGAAAGCTGGGGTTGAGGGGTACC 1062848 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || |||||| |||| | |||||| || ||| || Sbjct 1062849 AGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTATGT 1062908 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | | || ||| | | ||||| |||||| || || | || Sbjct 1062909 CTCCAAGACACGCTCAATATCATCG-------------CCCCATA--TACCAATAGACAC 1062953 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| ||| || || ||||| | |||| | |||| ||||| || Sbjct 1062954 ACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTATGA 1063013 Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTA--GGAAAAGGCAAAATCGCGGTCGTGGCGGATG 1630542 || || ||| ||| ||||||||| || | || ||||| ||||||| | ||| Sbjct 1063014 TCGCTCCAATGTCTTGAAGCCAAAGTATTGGTATTGG--AAATCACGGTCGTAGACAATG 1063071 Query 1630543 GCGGCGTCGAG 1630553 || | ||| || Sbjct 1063072 GCAGAGTCTAG 1063082 >seq4 Length=1301765 Score = 105 bits (116), Expect = 8e-17 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 1852040 AGGCCGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGC-CGCTCTCGGTGAGGCCCGG 1852098 ||||| ||||||||| | |||||| | ||||||||| |||| || ||| ||||| Sbjct 795683 AGGCCAATCTTGGAGCTCGGCTCGCTTGAGCTCATCTTCTGCGCT-TCTCCGAGACCCGG 795741 Query 1852099 CACGAGCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCG 1852158 ||| | | ||| | |||||| ||||||| ||||| || || |||| || Sbjct 795742 CACCATGGCGTTCATCAGGTGTGCTCGCTTCCTGTAGCCAAGCTTAGGGAGGTTCTCTAA 795801 Query 1852159 CGCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 1852218 ||||||| || || |||||||||||| |||||| | || || || || || |||| Sbjct 795802 GGCAAAGGTGAAGATTTTGCGCTGGTCGATCCCGCCGAGTTGTGCATCCACATCCAGGTA 795861 Query 1852219 CTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCA 1852253 | |||| || | |||||||||| |||||||| || Sbjct 795862 CCGCTCATCCAAAGCCTGCATGATCGGGTAGATCA 795896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107132388631311