Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq19 132 8e-25 seq77 122 1e-21 seq4 111 2e-18 seq66 95.1 2e-13 >seq19 Length=533231 Score = 132 bits (146), Expect = 8e-25 Identities = 208/292 (71%), Gaps = 13/292 (4%) Strand=Plus/Minus Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAA 794436 |||||||||||||| |||||||||||||| ||||| |||| || || || ||| Sbjct 112320 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGC---TGAAG 112264 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAG-GCCCTC 794495 ||||| ||||||||||| || ||| | || || || | |||||| || || | ||| Sbjct 112263 AAGATACCCTCGACGGCAGCGAAGGCAACCAGACGTTGGGCAAAGGT----AGAGTCCTT 112208 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 | | |||||| || ||||| || ||||| || | | |||| | || || | Sbjct 112207 GTCCTGGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAAC 112148 Query 794556 GGCGCGAAAGAGGT-GGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCG 794614 ||| ||||||| ||| | || | | || ||||||| ||||||||| ||||| || | Sbjct 112147 AGCGTTGAAGAGGTAGGTTC-GCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGG 112089 Query 794615 AGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 | |||||||| ||||| || || || || ||| ||||| || || ||||| Sbjct 112088 AATAGGTCTCGGAGTGAATATTCTCCATCATGATTTGGAATCCGTAGAAGCA 112037 >seq77 Length=1722064 Score = 122 bits (134), Expect = 1e-21 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 2035652 CAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTAT 2035711 ||||||||| ||||||||||||||||| ||| | || ||||| ||||| |||||| | || Sbjct 511762 CAACTACCTTGACATCAAGCCCCTCCTTGATGTTGGCTGCAAAACCGTTGCCAACATGAT 511821 Query 2035712 CAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 |||||||||||| || ||||| || |||||||| || ||||||| | ||| Sbjct 511822 CAAGGGCAAGTCTCCTGAGGAAATTCGCAAGACGTTCAACATCACGAACG 511871 >seq4 Length=1301765 Score = 111 bits (122), Expect = 2e-18 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 2411387 CAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGT-GAGGCCCGGCACC 2411445 ||||||||||| | |||||| | ||||||||| | | ||| ||| ||||||||| Sbjct 795687 CAATCTTGGAGCTCGGCTCGCTTGAGCTCATCTT-CTGCGCTTCTCCGAGACCCGGCACC 795745 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | ||| | |||||| ||||| | |||||| ||| || |||| || ||| Sbjct 795746 ATGGCGTTCATCAGGTGTGCTCGCTTCCTGTAGCCAAGCTTAGGGAGGTTCTCTAAGGCA 795805 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 |||| ||||| |||||||||||| |||||| | || || || || || |||| | || Sbjct 795806 AAGGTGAAGATTTTGCGCTGGTCGATCCCGCCGAGTTGTGCATCCACATCCAGGTACCGC 795865 Query 2411566 TCGTCGAGGGCCTGCATGAGCGGGTAGA 2411593 || || | |||||||||| |||||||| Sbjct 795866 TCATCCAAAGCCTGCATGATCGGGTAGA 795893 >seq66 Length=1847925 Score = 95.1 bits (104), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||||||||| |||||||||||| |||| || || || | | Sbjct 1842628 GTACTTGGTGACAGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCAGGGAG 1842687 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || || || | |||||||||||| |||| Sbjct 1842688 GATGAGACGAACTGAGGTCTGGATCTCTCGGG 1842719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916237570911437