Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 2e-13 >seq1 Length=4337333 Score = 93.3 bits (102), Expect = 2e-13 Identities = 118/162 (73%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||| ||||| |||||||| |||||||||| | ||| || Sbjct 1427879 CTCAATCAAATGGGCAATTGTCATTCGAGAGGGAATGGCGTGAGGGTTGATAATAATATC 1427938 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 || ||| || | | ||||||||||||| || | | | | |||||| Sbjct 1427939 GGGAGTCAGGCCTTCTCT---GCTGAAAGGCATATCCTCCTGTCGATAGGTAACACCAAT 1427995 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | |||||||||||||||||||| Sbjct 1427996 GGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 1428037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951972324197224