Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 >seq3 Length=1379917 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || ||||| || || || || || || |||||||| || || | | Sbjct 686901 CCACCACGCAGACGAAGAACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAA 686960 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || || ||||| |||||||| | || | || || || || || ||| Sbjct 686961 AGGGTTCGTCCGTCCTCTAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCGGGAGGA 687020 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || || ||| | || | |||||||| || ||| Sbjct 687021 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCAGATGACTCGACT 687080 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||| || || | ||| || || || || ||||| Sbjct 687081 TCCAATGTGATGGTTTTTCCGGTAAGGGTCTTGACGAAGATTTGCAT 687127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218810326703