Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 seq2 131 2e-25 seq82 104 2e-17 >seq3 Length=1379917 Score = 134 bits (148), Expect = 1e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || |||||||| | ||| | | | ||||| |||| Sbjct 687434 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCA-TCCTCAAGCT 687492 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| |||| | ||||||||||| ||||||||||| |||||||| |||| Sbjct 687493 GCTTGCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCT 687552 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||||| | ||| || |||| ||||| ||| ||||||| Sbjct 687553 TGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 687612 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || ||||| || |||||| Sbjct 687613 TCAAGGTCTTGACGAAGATTTGCATG 687638 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| |||| || ||| ||| |||||| |||||||| | Sbjct 686702 GGTAGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGACC-GTCCTCCAGCTGCTTAC 686760 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || ||||| || |||||||| ||||| || Sbjct 686761 CAGCGAAGATAAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGAATCTTGCTCT 686820 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| |||||| | | || || || | ||||| || || || || |||| Sbjct 686821 TCACGTTGTCAATAGTGTCGCTTGATTCGACCTCAAGGGTGATAGTCTTTCCAGTGAGAG 686880 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 686881 TCTTGACGAAAATCTGCAT 686899 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| || |||||||| ||| | || || ||||| ||||||||||| || || ||||| Sbjct 686972 GTCCTCTAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCGGGAGGAATACCCTCCTT 687031 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||| | | || | ||||| | | ||| || || | |||| Sbjct 687032 GTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCAGATGACTCGACTTCCAATGTGAT 687091 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||| || || || ||||| || ||||| Sbjct 687092 GGTTTTTCCGGTAAGGGTCTTGACGAAGATTTGCAT 687127 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||| ||| | | || | | | ||||| ||||||||||| Sbjct 687159 GTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 687217 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| ||||| || || |||||||| |||||| ||| Sbjct 687218 AGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTT 687277 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || |||| || ||| || || | |||| ||| ||||| || || || Sbjct 687278 GACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 687337 Query 133643 TTTTACGA 133650 || |||| Sbjct 687338 CTTGACGA 687345 >seq2 Length=1436644 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| | | | |||||||||||||| || Sbjct 785456 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACC 785514 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 785515 AGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 785574 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| | |||||| || | ||||| || || || || || || Sbjct 785575 GACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 785634 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 785635 CTTGACGAAAATCTGCATG 785653 >seq82 Length=1669964 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || ||| | || || ||||| ||||| || || ||||| |||||| Sbjct 1275208 TCCTCGAGCTGCTTACCAGCGAAGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 1275149 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || |||| ||||| | Sbjct 1275148 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 1275089 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 1275088 GTCTTGCCCGTCAGGGTCTTGACGAAA 1275062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420298450920