Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq19 167 3e-35 >seq19 Length=533231 Score = 167 bits (184), Expect = 3e-35 Identities = 354/512 (69%), Gaps = 26/512 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| || || ||||| ||||||||| | || | Sbjct 111823 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGATC 111881 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCA 1455888 || | || ||||| ||| || |||| | ||||||| |||| Sbjct 111882 TCTCCAAGGATC---TCCACGATTGGAACAACCGTCTGACCACTGACGAGCAGTTCTTCA 111938 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||| |||| ||||| || ||| || |||||||| || ||||||||| | Sbjct 111939 TCTCTCACATCCTTGCCTTCTT-CGCTGCTTCTGATGGCATTGTCAACGAGAACCTAGTT 111997 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | || || | |||||||| | || ||||| || | || ||||| ||||| ||| Sbjct 111998 GAGCGATTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTACGGATTCCAAATC 112057 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || || || ||||| || ||||| || || || || ||||||||| ||||||| Sbjct 112058 ATGATGGAGAATATTCACTCCGAGACCTATTCCCTGCTCATTGACACCTACATCAAGGAG 112117 Query 1456069 CCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAA 1456127 || | | || | ||| ||||||| ||| | || || | || | | | || || Sbjct 112118 CCTGCCCAGC-GAACCTACCTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAA 112176 Query 1456128 GGCCGACTGGGCGATGAAGTGGATCAA---CAAGGAGGGCCTCGACACTTTGCCGAGCGG 1456184 ||| |||||||| || |||||| | |||||| ||| || ||||||| | || Sbjct 112177 GGCTGACTGGGCCATTCGATGGATCCAGGACAAGGA----CTCTAC-CTTTGCCCAACGT 112231 Query 1456185 CTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCT-CGG-GCAGTTTCTGCGCCATCT 1456241 || || | ||| || || |||||||| ||||| ||| ||| || || | | |||||| Sbjct 112232 CTGGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGC--CTCCATCT 112289 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGT 1456273 | |||||||||||||| ||||||||||||||| Sbjct 112290 TCTGGCTCAAGAAGCGTGGCCTCATGCCCGGT 112321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177803194497446