Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2 120 3e-22 seq3 111 1e-19 seq82 93.3 4e-14 >seq2 Length=1436644 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| || ||| || | || || ||||||||||| ||||| Sbjct 785461 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 785520 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||||||| |||||| ||| | || Sbjct 785521 GATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 785579 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | |||||||| || ||||| | || || | Sbjct 785580 TGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 785639 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 785640 CGAAAATCTGCAT 785652 >seq3 Length=1379917 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||| ||| || || |||| |||||||||||||| || || Sbjct 686708 CTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGACCGTCCTCCAGCTGCTTACCAGCGAA 686767 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | | ||||||||| ||||| ||||| || Sbjct 686768 GATAAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGAATCTTGCTCTTCA-CGT 686826 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||||| ||||| ||||| | ||||| || || || || | ||| || | Sbjct 686827 TGTCAATAGTGTCGCTTGATTCGACCTCAAGGGTGATAGTCTTTCCAGTGAGAGTCTTGA 686886 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 686887 CGAAAATCTGCAT 686899 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | ||| || | || || |||||||| || || || Sbjct 687446 CTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 687505 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | ||| | || |||||||||| ||||| ||| | | | Sbjct 687506 AATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACATT 687565 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || || ||||| || || || Sbjct 687566 GTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGAC 687625 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 687626 GAAGATTTGCAT 687637 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | |||||| |||| || || ||||| || || || Sbjct 686936 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGTCCGTCCTCTAGTTGCTTGCCAGCGAA 686995 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||| | ||||| | |||||||||| |||||| ||||| | | Sbjct 686996 GATAAGTCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCTTCACATT 687055 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || || |||| ||||| ||||| || || | || || || Sbjct 687056 GTCGATGGTGTCAGATGACTCGACTTCCAATGTGATGGTTTTTCCGGTAAGGGTCTTGAC 687115 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 687116 GAAGATTTGCAT 687127 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||||| | |||||| | || || |||||||| || ||||| Sbjct 687165 TCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAG 687224 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||| ||||||||||| | ||||| | |||||||||| |||||| Sbjct 687225 ATCAGGCGCTGCTGGTCAGGAGGAATTCCCTCCTTGTCCTGGATCTT 687271 >seq82 Length=1669964 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| | ||||| | || || ||||||||||| || || | Sbjct 1275243 CCTTCTGGATGTTGTAGTCGGAGAGAGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 1275184 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||| ||||||| |||| || |||||||||| |||||| ||| | | | Sbjct 1275183 TCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1275124 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726 | | ||||| || || ||||| | ||||| || || ||||||| || || || | Sbjct 1275123 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGA 1275064 Query 35727 A 35727 | Sbjct 1275063 A 1275063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793132301640