Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq19 109 2e-18 >seq19 Length=533231 Score = 109 bits (120), Expect = 2e-18 Identities = 347/527 (66%), Gaps = 17/527 (3%) Strand=Plus/Plus Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408 ||||||||||||||||||||||| | |||||||||| | || ||| ||| | Sbjct 111869 GAGGAGATTGATCTCTCCAAGGATCTCCACGATTGGAACAACCG----TCTGACCACTGA 111924 Query 443409 CGCG-ATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGG 443464 || | | ||||||| | |||| | |||||||| || | || || || ||| Sbjct 111925 CGAGCAGTTCTTCATCTCTCACATCCTTGCCTTCTTCGCTGCTTCTGATGGCATTGTCAA 111984 Query 443465 TGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTA 443524 ||||| || || ||| ||| || ||| | | | ||||| || | |||||| Sbjct 111985 CGAGAACCTAGTTGAGCGATTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTA 112044 Query 443525 CGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGAC 443584 || |||||| | |||||||| |||||| ||||| ||| | | | || | || Sbjct 112045 CGGATTCCAAATCATGATGGAGAATATTCACTCCGAGACCTATTCCCTGCTCATTGACAC 112104 Query 443585 ACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCATGA--CCACGCC 443641 ||| || || || | ||||| || | ||| || || | ||| ||| || Sbjct 112105 -CTACATC--AAGGAGCCTGCCCAGCGAACCTACCTCTTCAACGCTGTTGATACCATTCC 112161 Query 443642 AGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTC-AGCT 443700 ||||| | ||| || |||||| | | ||| || | || || ||| | || Sbjct 112162 CTGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAG-GACAAGGACTCTACCT 112220 Query 443701 TCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTA 443760 | | | | || || || || || |||| ||||| || | || || ||||| |||| Sbjct 112221 TTGCCCAACGTCTGGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTT- 112279 Query 443761 GCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAA 443820 ||||||||||||||| | || |||||||| || |||| |||| ||||||| ||||| Sbjct 112280 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTTTGACCTTCTCCAACGAG 112339 Query 443821 CTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 || ||| ||| || ||||| | || |||||| ||||| ||||| Sbjct 112340 CTCATCTCTCGTGATGAGGGCCTTCACACCGACTTTGCCTGCCTTCT 112386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588334310903935