Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq66 210 3e-49 >seq66 Length=1847925 Score = 210 bits (232), Expect = 3e-49 Identities = 961/1507 (64%), Gaps = 49/1507 (3%) Strand=Plus/Plus Query 118143 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 118202 |||||||| |||||||| || ||| || | | | || || |||| ||||| ||| Sbjct 1061557 TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGC 1061616 Query 118203 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 118262 || |||||||| |||||||||| || || | || ||| || ||||| || || | | Sbjct 1061617 TCGAAGCACTCGTTGTTACCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAGG 1061676 Query 118263 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC-CTTGAGAGCG-TCCCAGTCGT 118320 || || |||||||||| ||| | | ||| | | | || || || |||||||| Sbjct 1061677 AGCAGACTGTTACGGATACCGTGAGTCTTAA--CATCCTCTCGAAGGCTCTCCCAGTCCC 1061734 Query 118321 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 118380 | | | || | | |||||| || |||||||||||||| | || || || | Sbjct 1061735 AAAGGTCGGAAGGCTTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAG 1061794 Query 118381 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGA 118437 | |||| || || || || ||||| ||| ||||| | ||||| || || Sbjct 1061795 AACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAG---GCAGTGA 1061851 Query 118438 GGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAAT 118497 |||| ||||| || || || ||||| || | || | | | ||||| || | Sbjct 1061852 GGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCTGGAGACT 1061911 Query 118498 CAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 118556 | || | | || || | || || |||| || ||||| || ||||| || || || Sbjct 1061912 CGAAGGGCATGCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCAAGACCGATA 1061970 Query 118557 GGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 118616 || || || | ||| || || ||||| | ||| || || || |||||| Sbjct 1061971 GGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGCACAGGGTAGTGGTTGACATCGATG 1062030 Query 118617 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 118676 | | | || | || | ||||||| ||| | ||| ||||| | | ||||| | Sbjct 1062031 ATCTTGTTCAAGTTGCGGACAACAACCTGACTGACCTGATGCAGCTTCTTGAAATCATA- 1062089 Query 118677 CTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 118733 || || ||| |||| ||| | ||| ||||| | || || || || || ||| Sbjct 1062090 --GCAAGCCTCATCATAGTTGATGAAAGCAGGCAGGGCAAGGGAGGCAAGGTTGCAAACA 1062147 Query 118734 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATG 118793 | | |||||| || |||||| || || || ||||||| || || || ||| Sbjct 1062148 GCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCTTCGGATG 1062207 Query 118794 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 118853 ||||| | |||||| || || ||| |||||| |||||||||||||||||| | || Sbjct 1062208 GTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCATGAAGGGG 1062267 Query 118854 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGT 118912 | || ||||| || |||| || ||| || || | ||| | | || | || | | Sbjct 1062268 TTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATACCAAAGCTTCTGGGCCTTG----AT 1062323 Query 118913 GGCGTTGGCTCGCCCCT---CTTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTC 118966 || ||| || |||| |||| ||||||||| ||||||||| ||||||||||| Sbjct 1062324 GGACTTG---CGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTC 1062380 Query 118967 ACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACC 119026 ||| | || | || || || || | ||||| | ||| | ||| | || Sbjct 1062381 ACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTT 1062440 Query 119027 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACA 119086 || |||||| ||||||||||| ||||| ||||||||||| ||| ||| || || || Sbjct 1062441 CTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGGC 1062500 Query 119087 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 119146 ||| | || || | || || || || | || | || || | || ||| ||||| Sbjct 1062501 GCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGCGTG 1062560 Query 119147 CCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTAC 119200 ||| || || ||||| | || | | || | | || |||| |||| | || Sbjct 1062561 CCAAGGCTCAAGGTAGATAGCAAAAGCACC---AGGTCGCTTGTTACCACCCTGATCAAC 1062617 Query 119201 ATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATT 119260 || | |||||| ||| || ||||| ||||| |||| | ||| | |||| || || Sbjct 1062618 GTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGGATGTACCGTT 1062677 Query 119261 TGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCC 119318 || || || || ||| | | |||| | || |||| | | ||||||||| Sbjct 1062678 GGTACCAGCAATGTAGGAGCC--AGTGGCACGGATTCGGTGGGCATTGAGACCAATACCA 1062735 Query 119319 CCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAG 119378 || ||| ||| || || || || | |||| | | ||||| || || || | Sbjct 1062736 CCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGATACCGTCAATGCTG 1062795 Query 119379 TCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTG 119438 || |||| | | | | |||||| || | || || || |||||||||||| Sbjct 1062796 TCCTCCTTCATATCAACCAAGAAGCATGAAGAAAGCTGGGGTTGAGGGGTACCAGCGTTG 1062855 Query 119439 AAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCA 119496 ||||| || || | || ||| ||| | | |||| |||||| || ||| ||||||| Sbjct 1062856 AAGAGGGTGGGGGAAGCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCCA 1062913 Query 119497 AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGG 119556 |||| ||| || || || ||||| || || || ||||| | ||||| || | Sbjct 1062914 AGACACGCTCAATATCATCGCCCCATATACCAATAGACACACGCATGATCATGTGCTGAG 1062973 Query 119557 GTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGAC 119616 | ||| | | | || || | | | ||||||| |||||| ||||||| | Sbjct 1062974 GACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTATGATCGCTCCAATGTCTTGAAGC 1063033 Query 119617 CAAAATA 119623 |||| || Sbjct 1063034 CAAAGTA 1063040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434558373480