Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq33 127 4e-24 >seq33 Length=5643559 Score = 127 bits (140), Expect = 4e-24 Identities = 160/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 |||||||| | ||| ||| | || ||| ||| ||||||||||| | | || ||| Sbjct 146715 AGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTGCTTGGCATGAACTCCAACCTGATGA 146774 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 |||||||| || || || || ||||| | | || || || || ||||||| || | Sbjct 146775 AGCAGTACATTGAGTTTGTCGCTGACCGTCTACTCGTCGCTCTCGGCAACGAGAAGGTTT 146834 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| | | |||||||| | || |||||| ||| || ||| || |||||||||| Sbjct 146835 ACAAGGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACT 146894 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||| ||||||||| |||||| |||| | ||||||| Sbjct 146895 TCTTCGAGAAGCGTGTCGCTGACTACCAGAAGGCTGGTGT 146934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822942837140