Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq73 161 1e-34 >seq73 Length=2503951 Score = 161 bits (178), Expect = 1e-34 Identities = 628/969 (65%), Gaps = 36/969 (4%) Strand=Plus/Plus Query 71694 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTAT 71750 || ||||| || || || || ||||| || ||||||| || |||| || | || Sbjct 1796366 CAGGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGG---GGCACAGTACTCGAT 1796422 Query 71751 AATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 71810 || |||||||| |||||| | |||||| || | || | || || ||||| Sbjct 1796423 GATCTCAGTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCG 1796482 Query 71811 GTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 71870 |||||| |||||||| ||||| || || || | || || || |||| | || | || Sbjct 1796483 GTTACAGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGAT 1796542 Query 71871 CGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTCGT 71926 || | ||| | | || | ||||| || |||| | ||| ||| || |||| Sbjct 1796543 GGCATACCAAA-GCTTCTGGGCCTTGATGGA---CTTGCGACCCTTACCTTCCCTCTCGT 1796598 Query 71927 A-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATT 71983 | || | ||| | | || ||||| || || | ||| | | | | ||||| || | Sbjct 1796599 ACTTCTCGTAGAGGGCC--TCAAACTCTTCACCGTA-GCAGTCGGCAAGACCAGGGCACT 1796655 Query 71984 CATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAG 72043 | || || ||||| | | ||||||||| | | | || || ||||| || || |||| Sbjct 1796656 CGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAG 1796715 Query 72044 GAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTT 72103 | ||||| || || | || || || | || | |||||| || || |||||| Sbjct 1796716 GGATCCAGAGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTC 1796775 Query 72104 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 72163 ||||| |||||| | | | ||||| ||||| || || | ||| || || | | | | Sbjct 1796776 GGAGATCAAGGAACTCAAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCAC 1796835 Query 72164 CCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 72223 | || || ||||| || |||||||| | ||| | || ||||| || | || | | || Sbjct 1796836 CAGGTCGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCA 1796895 Query 72224 TTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAA 72283 | |||| || ||| ||||||| ||| ||||| || | || ||| ||| ||||||| | Sbjct 1796896 TAGGAACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGA 1796955 Query 72284 TAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 72341 | || ||||| |||| || || || ||||| || || || | || || || Sbjct 1796956 TTCGGTGGGCATTGA--GACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTT 1797013 Query 72342 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 72401 | ||||||||||| || || || || || ||| |||| | || | || || || Sbjct 1797014 GAGGGTATCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAGGA 1797073 Query 72402 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 72461 | ||| | || || || || || || | ||| || ||||| || || || | || Sbjct 1797074 AAGCTGGGGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTT 1797133 Query 72462 TTCAGACAGTAGATTGTACGTCT-CAATA---GCTGATTCT-AT-ATCCCATTGATGTAT 72515 |||| || ||||| |||| ||| | ||| | | | || | |||| ||| Sbjct 1797134 GCTGGACATAAGGTTGTATGTCTCCAAGACACGCTCAATATCATCACCCCA------TAT 1797187 Query 72516 TCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 72575 || | | |||||||| | ||| |||||||| | ||| || |||||| | || || Sbjct 1797188 ACCAATAGACACACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTT 1797247 Query 72576 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 72635 | | ||| ||| ||||| || || || ||||| || | |||| || || || || Sbjct 1797248 GAGGAGGTATGATCGCTCCAACGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTC 1797307 Query 72636 GTAAATAAT 72644 ||| | ||| Sbjct 1797308 GTAGACAAT 1797316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138545639280