Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10]
78 sequences; 43,168,069 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq73 161 1e-34
>seq73
Length=2503951
Score = 161 bits (178), Expect = 1e-34
Identities = 628/969 (65%), Gaps = 36/969 (4%)
Strand=Plus/Plus
Query 71694 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTAT 71750
|| ||||| || || || || ||||| || ||||||| || |||| || | ||
Sbjct 1796366 CAGGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGG---GGCACAGTACTCGAT 1796422
Query 71751 AATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 71810
|| |||||||| |||||| | |||||| || | || | || || |||||
Sbjct 1796423 GATCTCAGTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCG 1796482
Query 71811 GTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 71870
|||||| |||||||| ||||| || || || | || || || |||| | || | ||
Sbjct 1796483 GTTACAGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGAT 1796542
Query 71871 CGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTCGT 71926
|| | ||| | | || | ||||| || |||| | ||| ||| || ||||
Sbjct 1796543 GGCATACCAAA-GCTTCTGGGCCTTGATGGA---CTTGCGACCCTTACCTTCCCTCTCGT 1796598
Query 71927 A-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATT 71983
| || | ||| | | || ||||| || || | ||| | | | | ||||| || |
Sbjct 1796599 ACTTCTCGTAGAGGGCC--TCAAACTCTTCACCGTA-GCAGTCGGCAAGACCAGGGCACT 1796655
Query 71984 CATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAG 72043
| || || ||||| | | ||||||||| | | | || || ||||| || || ||||
Sbjct 1796656 CGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAG 1796715
Query 72044 GAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTT 72103
| ||||| || || | || || || | || | |||||| || || ||||||
Sbjct 1796716 GGATCCAGAGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTC 1796775
Query 72104 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 72163
||||| |||||| | | | ||||| ||||| || || | ||| || || | | | |
Sbjct 1796776 GGAGATCAAGGAACTCAAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCAC 1796835
Query 72164 CCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 72223
| || || ||||| || |||||||| | ||| | || ||||| || | || | | ||
Sbjct 1796836 CAGGTCGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCA 1796895
Query 72224 TTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAA 72283
| |||| || ||| ||||||| ||| ||||| || | || ||| ||| ||||||| |
Sbjct 1796896 TAGGAACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGA 1796955
Query 72284 TAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 72341
| || ||||| |||| || || || ||||| || || || | || || ||
Sbjct 1796956 TTCGGTGGGCATTGA--GACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTT 1797013
Query 72342 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 72401
| ||||||||||| || || || || || ||| |||| | || | || || ||
Sbjct 1797014 GAGGGTATCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAGGA 1797073
Query 72402 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 72461
| ||| | || || || || || || | ||| || ||||| || || || | ||
Sbjct 1797074 AAGCTGGGGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTT 1797133
Query 72462 TTCAGACAGTAGATTGTACGTCT-CAATA---GCTGATTCT-AT-ATCCCATTGATGTAT 72515
|||| || ||||| |||| ||| | ||| | | | || | |||| |||
Sbjct 1797134 GCTGGACATAAGGTTGTATGTCTCCAAGACACGCTCAATATCATCACCCCA------TAT 1797187
Query 72516 TCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 72575
|| | | |||||||| | ||| |||||||| | ||| || |||||| | || ||
Sbjct 1797188 ACCAATAGACACACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTT 1797247
Query 72576 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 72635
| | ||| ||| ||||| || || || ||||| || | |||| || || || ||
Sbjct 1797248 GAGGAGGTATGATCGCTCCAACGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTC 1797307
Query 72636 GTAAATAAT 72644
||| | |||
Sbjct 1797308 GTAGACAAT 1797316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138545639280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |