Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq33 289 4e-73 seq73 145 1e-29 >seq33 Length=5643559 Score = 289 bits (320), Expect = 4e-73 Identities = 589/850 (69%), Gaps = 35/850 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | ||| ||| | ||||| Sbjct 146078 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGATCTC 146137 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AGTTT---AT 125134 |||||||| || |||||||| | | ||| |||| ||||| |||| |||| || Sbjct 146138 TCCAAGGATCTCCACGATTGGAACAACCGTCTGACC---ACTGA-CGAGCAGTTCTTCAT 146193 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || ||||| | |||||||| || | || ||||| || |||||||| || || ||||| Sbjct 146194 CTCTCACATCCTTGCCTTCTTCGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGA 146253 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252 |||||| ||| | || || |||| ||| ||||| ||||||||||||||| Sbjct 146254 G-CGATTCAGCGGCGAGGTCCAGATCCCTGAGGC-TCGATGCTTCTACGGATTCCAAATC 146311 Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT 125312 ||||| ||||| | ||||| || | || || || ||||||| ||||| || Sbjct 146312 ATGATGGAGAATATTCACTCCGAGACCTATTCCCTGCTCATTGACACCTACATCAAGGAG 146371 Query 125313 CC-GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371 || || | ||| | ||||| ||||| | || || | || | || || || || Sbjct 146372 CCTGCCCAGCGAACCTAC-CTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAA 146430 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 |||| | |||| ||||| |||||| | ||| | | ||| | | ||| | | ||||| Sbjct 146431 GGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAACGTCTGGT 146490 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 || ||||| || || ||||| |||||||| ||| ||||| ||||||| ||||| Sbjct 146491 TGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 146550 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 ||||||||| || ||||||||||| |||| | |||||| | || ||||| ||||| Sbjct 146551 CAAGAAGCGTGGCCTCATGCCCGGTTTGACCTTCTCCAACGAGCTCATCTCTCGTGACGA 146610 Query 125552 GGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCT-GCGTCCCGAGTGCA 125610 |||||| ||| ||||||||| | | || ||| | | |||| | || |||| Sbjct 146611 GGGCCTTCACACCGACTTTGCC-TGC--CTTCTTCACTCCCATCTCAAGGGCC--GTGC- 146664 Query 125611 GATCCAGC-GATGA-AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668 | | ||| ||||| ||| ||||| |||| |||||||| | || || || || Sbjct 146665 TAGCAAGCAGATGATCCAGGACATCA--TTTGT----GATGCCGTCACCATTGAGCAGGA 146718 Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728 ||| || || || | || || | || |||||||||||| ||| || ||| | Sbjct 146719 GTTCCTCACTGAGGCTCTCCCCTGTGCCCTGCTTGGCATGAACTCCAACCTGATGAAGCA 146778 Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTA 125785 |||||| |||||||| || || |||||||| || | ||| || ||| |||| Sbjct 146779 GTACATTGAGTTTGTCGCTGACCGTCTACT---CGTCGCTCTCGGCAACGAGAAGGTTTA 146835 Query 125786 CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTT 125845 ||| |||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 146836 CAAGGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTT 146895 Query 125846 TTTCGAGAAG 125855 ||||||||| Sbjct 146896 CTTCGAGAAG 146905 >seq73 Length=2503951 Score = 145 bits (160), Expect = 1e-29 Identities = 312/463 (67%), Gaps = 14/463 (3%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| || || || || || || ||| | || ||||| | || ||| Sbjct 1796869 CGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCT 1796810 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || ||||| || | || | || || ||| || || |||| Sbjct 1796809 TGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 1796750 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC--- 97040 || ||| | ||| |||| || |||||| | || || | ||||||||||| || Sbjct 1796749 CGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAG 1796690 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 || |||| | | |||| ||| ||||||||| || || || ||||| |||| ||| Sbjct 1796689 AAGAACGGAG---AGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGC 1796633 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 | || ||||||||||||||| ||| | |||||| |||| | || | | Sbjct 1796632 TACGGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAG----AGGGAAGGTAAGGGTCG 1796577 Query 97161 CGAGTCGATGCACG---AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 | |||| || | | |||| || ||| | |||||| | ||| ||| ||||| || Sbjct 1796576 CAAGTCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGG 1796517 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 || || | ||| || ||||||||| || || ||||| |||||||| || | || Sbjct 1796516 AAACCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGG 1796457 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||||| |||| ||||||||||| || || | |||||| Sbjct 1796456 CACCATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTAC 1796414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058477467280