Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2 102 7e-17 >seq2 Length=4137638 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| ||||| || | || || ||||||| |||| ||||||||||| || || Sbjct 2556173 GTAGACTCCTTCTGGATATTGTAGTCGCTCAAAGTGCGACCGTCCTCCAGCTGCTTACCA 2556114 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | ||||| || || |||||||| || ||||| | ||| || ||| Sbjct 2556113 GCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTGCTCTTC 2556054 Query 94931 ACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| | | | |||||| || || ||||| |||| ||||| || |||||||| ||||| Sbjct 2556053 ACGTTGTCAATAGTGTC-GCTTGATTCGACCTCAAGGGTGATAGTCTTTCCAGTGAGAGT 2555995 Query 94990 TTTCACAAAGATCTGCAT 95007 || || || |||||||| Sbjct 2555994 CTTGACGAAAATCTGCAT 2555977 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||||||||| ||| || ||||| || | ||| || || | || ||| | |||| Sbjct 2555957 ACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAG--AAAGGGTTCGTCCGTCCT 2555900 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || || || || | ||||| | || || || || ||||||||||| || ||||| | Sbjct 2555899 CTAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATACCCTCCTTGTCCT 2555840 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | ||||||| | ||| ||||||| ||||| || | |||||||||| Sbjct 2555839 GGATCTTCGACTTGACGTTGTCGATGGTGTCAGATGACTCGACTTCCAATGTGATGGTTT 2555780 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || || || ||||| ||||| Sbjct 2555779 TTCCGGTAAGGGTCTTGACGAAGATTTGCAT 2555749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290762916080