Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq33 104 4e-18 seq12 104 4e-18 >seq33 Length=5643559 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | ||||| |||||||| || || |||||||| ||||| Sbjct 419475 GCCAAGCGTCACCGCAAGATTT-TGCGAGACAACATCCAGGGTATTACCAAGCCCGCTAT 419417 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| | |||| Sbjct 419416 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 419376 >seq12 Length=4746347 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| |||||||| || ||||||||||| ||||| Sbjct 1571846 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTAT 1571904 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||| ||||| ||||||||| | |||| Sbjct 1571905 CCGACGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATTTCTG 1571945 Score = 95.1 bits (104), Expect = 2e-15 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | ||| ||||||| |||||| || || |||| ||||| Sbjct 1572001 TGATCTACGAGGAGACACGCGGTGTCTTGAAGACCTTCCTTGAGGGTGTCATCCGTGATG 1572060 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| || || || | ||| ||||||||| Sbjct 1572061 CCGTCACCTACACCGAGCACGCCAAGCGAAAGACAGTGACATCTCTCGATGTCGTCTATG 1572120 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | | || || |||||||| | |||| ||||| || Sbjct 1572121 CCCTTAAGCGACAAGGCCGCACTCTTTACGGTTTCGG 1572157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075128684054