Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10]
78 sequences; 43,168,069 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq73 365 1e-95
>seq73
Length=2503951
Score = 365 bits (404), Expect = 1e-95
Identities = 1171/1786 (66%), Gaps = 52/1786 (3%)
Strand=Plus/Minus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458
|||||| ||||| ||| ||||| ||| || | || | ||||| ||||| || ||
Sbjct 1797274 AAGACGTTGGAGCGATCATACCTC-CTCAAGATTGACGGCAAGATTGTCGAACGTCCTCA 1797216
Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCG--GATGTTGATGCCGCGATT 363516
||| ||| | |||||||| |||||||||| || | | ||| |||| | |
Sbjct 1797215 GCACATGATCATGCGTGTGTCTATTGGTAT--ATGGGGTGATGATATTGAGCGTGTCTTG 1797158
Query 363517 GAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAACAATGTAC 363573
|| ||||| || ||| | || || || | ||||| || || | || || | | |
Sbjct 1797157 GAGACATACAACCTTAT--GTCCAGCAAGT-TCTTCACCCATGCTTCCCCCACCCTCTTC 1797101
Query 363574 AATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGAT 363633
|| ||||| || | | | || ||| | || || ||||| | | | |||||||| ||
Sbjct 1797100 AACGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGATATGAAGGAGGAC 1797041
Query 363634 TCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGC 363693
||| || ||||||| ||| || || |||| ||||| | |||||||||| || ||
Sbjct 1797040 AGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGGT 1796981
Query 363694 GGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTTACATTCGCGGCACA 363750
|| |||||| | | || | || | | ||||| || | | |||||| || ||
Sbjct 1796980 GGTATTGGTCT--CAATGCCCACCGAATCCGTGCCACTGG-CTCCTACATTGCTGGTACC 1796924
Query 363751 GGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTA 363809
|| ||| || || || | ||||| ||||| ||||| || |||| ||||| | ||
Sbjct 1796923 AACGG-TACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCCGCTA 1796865
Query 363810 CGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCA 363869
||| || |||||||| ||||| || || |||||||| || || |||||| ||
Sbjct 1796864 CGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCTTGGCA 1796805
Query 363870 TGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGC 363929
|| ||| | |||||||| ||||| ||||| || ||| || || ||||| | || ||
Sbjct 1796804 CGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGC 1796745
Query 363930 ACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGG 363989
|| || |||||| || || ||| | |||||| ||| |||||||| || ||| ||
Sbjct 1796744 CCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAGA-AGA 1796686
Query 363990 TAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTG 364048
|| | ||| | ||| | ||||| |||| || || |||||| |||| | ||||
Sbjct 1796685 ACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTACGGTG 1796626
Query 364049 ACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTC 364108
| || | || || || ||||| ||||| || ||| || |||| ||| ||| | ||
Sbjct 1796625 AAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTCGCAAGTCCATCA 1796566
Query 364109 CCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATA 364168
|| |||||||| |||| ||||||| | || | |||| ||||| |||| |||| |
Sbjct 1796565 AGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGAAACCCCTTCA 1796506
Query 364169 TGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGC 364228
|| | ||||| ||| | || ||||||||| ||||||| || |||| || || || | |
Sbjct 1796505 TGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCC-GA 1796447
Query 364229 AGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGT 364287
|| | || || || || ||||| || || ||| || || || ||| || || ||
Sbjct 1796446 AGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCTGTTTGC 1796387
Query 364288 AACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTA---CTTT---TGACCAC 364341
|||||||| || | || || || || || | || ||| | ||| ||| |
Sbjct 1796386 AACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTATGATGAGGCTTGCTATGATTTC 1796327
Query 364342 CAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAG 364401
|| | || || | || | | || | |||| | ||||| | |||||
Sbjct 1796326 AAGAAGCTGCATCAGGTCAGTCAGGTTGTTGTCCGCAACTTGAACAAGATCATCGATGTC 1796267
Query 364402 AATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATTG 364456
|| | || || | | || || || ||| || |||||||| || || || |
Sbjct 1796266 AACCACTACCCTGTGCAAGAGGCTCGCAACAGC-----AACATGCGTCACCGACCTATCG 1796212
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG--ATGGCATTTGATTC 364514
|||||||||||||||| || ||||| | ||| | ||||| ||| | || || ||
Sbjct 1796211 GTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCT--TGCTCTGCGCATGCCCTTCGAGTC 1796154
Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574
|| || ||| | | || || ||| |||||||||| || || || || || | ||
Sbjct 1796153 TCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCTGCCCTCAC 1796094
Query 364575 TGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633
||| || ||| | ||||| || |||| |||||||| | |||| || ||
Sbjct 1796093 TGCCTCC-GTGCAGTTGGCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGTTCTCCCG 1796035
Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693
|| |||| | ||||||| || | ||||| |||| ||| || | || ||| |||
Sbjct 1796034 CCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCTTCCGACCTTTGGGACT 1795975
Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TCC-CTCGTTACAG 364750
|||| | || || | ||||||| | |||| || ||| || ||| || |
Sbjct 1795974 GGGAGAGCCTTCGAGAGGATGTTAAGACTAACGGTATCCGTAACAGTCTGCTCCTT---G 1795918
Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810
| || ||||| || || ||| | ||||| || || ||||||||||||||||| || |
Sbjct 1795917 CCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCTT 1795858
Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870
|| ||| |||| ||||| || ||| | || || || | ||| || || |
Sbjct 1795857 ACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCAGGTTGTCAACCCCT 1795798
Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930
| ||||||||||| |||| || ||||| ||| |||||||||| ||| |
Sbjct 1795797 GGTTGCTCAAGGATCTTGTCGACATGGGCTTGTGGTCTGATGCCATGAAGAACCGTATTA 1795738
Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990
| ||| ||| |||||| | |||||||| || | || | || | ||| || |||
Sbjct 1795737 TTTCCGATAACGGTTCTATTCAGAACATCCCCAACATCCCTGCCGACGTCAAGGCTCTTT 1795678
Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050
|||| || || ||||| ||||| ||| | | | ||||| ||||| || ||||
Sbjct 1795677 ACAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTTGTCCAGATGGCTGCCGACCGAGGTG 1795618
Query 365051 CTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGC 365110
|||| ||| |||| |||||| | ||| | ||||| | || || | ||||
Sbjct 1795617 CTTTCATCGATCAGTCCCAGTCCCTCAACATTCACATGAAGGATCCCACGATGGGCAAGA 1795558
Query 365111 TTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| || |||||| ||| ||| ||||| ||||| ||||| ||
Sbjct 1795557 TCACCAGCATGCACTTCGCCGGCTGGAAGCTTGGTCTCAAGACTGG 1795512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352297460996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |