Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 >seq2 Length=4137638 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| ||| |||||||| | ||||| ||||| ||| Sbjct 2555749 ATGCAAATCTTCGTCAAGACCCTTACCGGAAAAACCATCACATTGGAAGTCGAGTCATCT 2555808 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || ||||| ||||||||| Sbjct 2555809 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAA 2555868 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || ||||| ||| |||| || | || || | || ||||| Sbjct 2555869 CAGCGACTTATCTTCGCTGGCAAGCAACTAGAGGACGGACGAACCCTTTCTGACTACAAC 2555928 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || || || || || || Sbjct 2555929 ATTCAGAAGGAGTCAACTCTGCACTTGGTTCT 2555960 Score = 114 bits (126), Expect = 1e-20 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||||||| || ||||||| |||| || ||||| || Sbjct 2555239 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 2555298 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || || ||| | || | ||| ||||| || || || || |||||| Sbjct 2555299 GACACTATCGA--CAATGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATCCCTCCTGAC 2555355 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | ||||| || ||||| || | || |||| ||||| | |||||| Sbjct 2555356 CAGCAGCGATTGATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCTGATTAC 2555415 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || ||| | || || Sbjct 2555416 AACATCCAGAAGGAGTCCACCCTCCATCTCGTCCT 2555450 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | || || || ||||||| | || || ||||| || || || ||||| Sbjct 2555533 GTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGATACCATCGAC 2555592 Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130 | ||| || ||| ||||| || || ||||| || ||||||||||| | || Sbjct 2555593 AACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAACAGCGCCTGATC 2555652 Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190 ||||| ||||| || | || |||| || || | | ||| ||||| || || || ||| Sbjct 2555653 TTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTCGCCGACTACAACATCCAGAAGGAA 2555712 Query 25191 TCCACGCTACATTTAGTGCT 25210 ||||| || ||| | || || Sbjct 2555713 TCCACACTTCATCTCGTCCT 2555732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327588067570